 |
Job Description | P00957 | Confidence | 32.20% | Date | Thu Jan 5 10:57:20 GMT 2012 |
Rank | 109 | Aligned Residues | 110 |
% Identity | 14% | Template | d1z7ma1 |
SCOP info | Class II aaRS and biotin synthetases
| Class II aaRS and biotin synthetases
| Class II aminoacyl-tRNA synthetase (aaRS)-like, catalytic domain
|
Resolution | 2.90 |
|
 |
  |   |
6 | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|  |  |
|
|
|
|
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | E | I | R | Q | A | F | L | D | F | F | H | S | K | G | H | Q | V | V | A | S | S | S | L | V | P | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
H | N | D | P | T | L | L | F | T | N | A | G | M | N | Q | F | K | D | V | F | L | G | L | D | K | R | N | Y | S | R |
Query Conservation |   |
  |
|
|
|   |   |
|
|   |
|
|   |   |   |
|
|   |   |
|   |
|   |
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |
|   |   |
|
|
|   |
|
|
|
|   |   |
|
|   |   |
|   |
|   |   |   |
|   |   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|   |   |   |
|   |   |   |
|   |   |   |
|
|   |   |
|   |
|
|   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |
|   |
|
|
|
|   |
|   |   |
|
|
|   |   |   |   |   |   |   |   |   |   |   |
|
Template Sequence |   |
R | Q | I | E | G | R | L | R | K | L | F | S | L | K | N | Y | Q | E | V | M | P | P | S | F | E | Y | T | Q | L | Y | T | A | L | E | S | N | G | K | T | F | N | Q | E | K | M | F | Q | F | I | K | H | E | G | Q | S | I | T | L | R | Y | D | F | T | L | P | L | V | R | L | Y | S | Q | I | K | D | S | T | S | A | R |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|  |  |
|
|
|
| S |  |  |  |  |  |  |  |  |  |  |  |
| S | S | S |
|
|
| T | T | S |
|
|  |  |  |
| T | T |
|
|  |  |  |  |
|
|
| S |  |  |  |  |  |  |  |  |  | T |
|
| S |
|
|
|  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
24 | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . |
  |
  |   |
62 | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . |
Predicted Secondary structure |   |
|
|  |  |
|
|
|  |  |
|
|
|
|
|
|
|  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |
|
|
|
|  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | T | T | S | Q | R | C | V | R | A | G | G | K | H | N | D | L | E | N | V | G | Y | T | A | R | H | H | T | F | F | E | M | L | G | N | F | S | F | G | D | Y | F | K | H | D | A | I | Q | F | A | W | E | L | L | T | S | E | K | W | F | A | L | P | K | E | R | L | W | V | T |
Query Conservation |   |
  |   |   |   |
|
|
|
|
|   |
|
|
|
|
|
|
|
|   |
|
|   |
|   |
|
|
|
|
|
|
|
|
|
|
|   |
|
|
|
|
|
|
|   |
|
|
|   |   |
|
|
|   |
|
|   |   |   |   |   |   |
|   |   |   |
|
|
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|   |
|   |
|
|
| . | . | . | . | . |   |   | . | . | . | . | . | . |
|
|   |   |
|   |
|   |
|
|
|
|   |   |   |   |   |   | . | . |
|
|
|   |
|   |
|   |   |   |   |
|   |   | . | . | . |
|
|   |   |   |   |   |
|   |
|   |
Template Sequence |   |
Y | S | Y | F | G | K | I | F | R | . |
. |
. |
. |
. |
K | E | . |
. |
. |
. |
. |
. |
K | E | N | Y | Q | I | G | I | E | L | F | G | E | S | A | D | K | S | . |
. |
E | L | E | I | L | S | L | A | L | Q | V | I | E | Q | . |
. |
. |
L | G | L | N | K | T | V | F | E | I | G |
Template Known Secondary structure |   |
 |  |  |  |  |  |
|
|
| . | . | . | . | . |
|
| . | . | . | . | . | . |
|
|
|  |  |  |  |  |  |  |  | S | S |
|  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . |  | T |
| S | S |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |
|
|  |  |
| . | . | . | . | . |
|
| . | . | . | . | . | . |
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . |
|
|
|
|
|  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
104 | . | . | . | . | . | 110 | . | . | |
|
|
|
|
. | . | |
|
|
|
|
|
. | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | |
|
. | . | . | . | . | . | . | 140 | . | . | . | . | . | . | |
|
|
. | . | . | 150 | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|