Job Description P00957 Confidence 66.26% Date Thu Jan 5 10:57:20 GMT 2012 Rank 44 Aligned Residues 178 % Identity 20% Template d1nj8a3 SCOP info Class II aaRS and biotin synthetases Class II aaRS and biotin synthetases Class II aminoacyl-tRNA synthetase (aaRS)-like, catalytic domain Resolution 3.20

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.		.	.	.	.	.	.		50	.
Predicted Secondary structure																																								.							.			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																								.							.			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	E	I	R	Q	A	F	L	D	F	F	H	S	K	G	H	Q	V	V	A	S	S	S	L	V	P	H	N	D	P	T	L	L	F	T	N	A	G	.	M	N	Q	F	K	D	.	V	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																								.							.			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																													.	.	.									.							.			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																													.	.	.
Template Sequence		R	Y	T	F	E	I	I	R	N	L	L	D	E	S	G	H	D	E	A	L	F	P	M	L	I	P	E	.	.	.	D	L	L	A	K	E	A	E	H	I	K	G	F	E	D	E	V	Y	W	V	T	H	G	G	K	T	Q	L	D	V	K	L	A	L	R	P	T	S	E	T	P	I	Y	Y	M	M	K	L	W	V
Template Known Secondary structure															T	T								S					.	.	.								S	S	S	G	G	G	G	G	G							S	S	S	S										S	S	S										T	T
Template Predicted Secondary structure																													.	.	.
Template SS confidence
		38	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.				.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.
		52	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.		.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130
Predicted Secondary structure																																												.
Query SS confidence																																												.
Query Sequence		L	G	L	D	K	R	N	Y	S	R	A	T	T	S	Q	R	C	V	R	A	G	G	K	H	N	D	L	E	N	V	G	Y	T	A	R	H	H	T	F	F	E	M	.	L	G	N	F	S	F	G	D	Y	F	K	H	D	A	I	Q	F	A	W	E	L	L	T	S	E	K	W	F	A	L	P	K	E	R	L	W	V
Query Conservation																																												.
Alig confidence									.												.	.	.	.	.																			.									.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation									.												.	.	.	.	.																												.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	V	H	T	D	L	P	.	I	K	I	Y	Q	I	V	N	T	F	R	.	.	.	.	.	Y	E	T	K	H	T	R	P	L	I	R	L	R	E	I	M	T	F	K	E	A	H	T	A	H	S	T	.	.	K	E	E	A	E	N	Q	V	K	E	A	I	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure			B	T	T	S			.										B		.	.	.	.	.				S			B	T	T	T	B		S	B		S										S	S	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure									.												.	.	.	.	.																												.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		115	.	.	.	.	120	.		.	.	.	.	.	.	.	.	130	.	.						.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.			160	.	.	.	.	.	.	.	.	.	170	.	.
		131	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Predicted Secondary structure
Query SS confidence
Query Sequence		T	V	Y	E	S	D	D	E	A	Y	E	I	W	E	K	E	V	G	I	P	R	E	R	I	I	R	I	G	D	N	K	G	A	P	Y	A	S	D	N	F	W	Q	M	G	D	T	G	P	C	G	P	C	T	E	I	F	Y	D	H	G	D	H	I	W	G	G	P	P	G	S	P	E	E	D	G	D	R	Y	I	E
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	I	Y	K	K	F	F	D	T	L	G	I	P	Y	L	I	S	K	R	P	E	.	.	.	.	.	.	.	.	.	.	.	.	W	D	K	F	P	G	A	E	Y	T	M	A	F	D	T	I	F	P	D	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	T	M	Q
Template Known Secondary structure		.	.	.	.	.	.	.	.										T										T	.	.	.	.	.	.	.	.	.	.	.	.	T	S			T	T		S										T	T	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
										173	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.													.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.																	.	.	.	.
		211	.	.	.	.						.						.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.
Predicted Secondary structure							.	.	.	.	.		.	.	.	.	.
Query SS confidence							.	.	.	.	.		.	.	.	.	.
Query Sequence		I	W	N	I	V	.	.	.	.	.	F	.	.	.	.	.	M	Q	F	N	R	Q	A	D	G	T	M	E	P	L	P	K	P	S	V	D	T	G	M	G	L	E	R	I	A	A	V	L
Query Conservation							.	.	.	.	.		.	.	.	.	.
Alig confidence							.	.	.	.	.		.	.	.	.	.				.																			.	.	.
Template Conservation																					.																			.	.	.
Template Sequence		I	A	T	V	H	N	L	G	Q	N	F	S	K	T	F	E	I	I	F	.	E	T	P	T	G	D	K	D	Y	A	Y	Q	T	C	Y	G	I	S	.	.	.	D	R	V	I	A	S	I
Template Known Secondary structure										T						T	T				.			T	T	S	S													.	.	.	T
Template Predicted Secondary structure																					.																			.	.	.
Template SS confidence
		217	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.		.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.				.	.	.	.	.	.	260

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions