Job Description P00957 Confidence 100.00% Date Thu Jan 5 10:57:20 GMT 2012 Rank 6 Aligned Residues 235 % Identity 23% Template d1j5wa_ SCOP info Class II aaRS and biotin synthetases Class II aaRS and biotin synthetases Class II aminoacyl-tRNA synthetase (aaRS)-like, catalytic domain Resolution 1.95

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50		.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
Predicted Secondary structure																																															.
Query SS confidence																																															.
Query Sequence		A	E	I	R	Q	A	F	L	D	F	F	H	S	K	G	H	Q	V	V	A	S	S	S	L	V	P	H	N	D	P	T	L	L	F	T	N	A	G	M	N	Q	F	K	D	V	.	F	L	G	L	D	K	R	N	Y	S	R	A	T	T	S	Q	R	C	V	R	A	G	G	K	H	N	D	L	E	N	V	G	Y	T
Query Conservation																																															.
Alig confidence																			.	.	.	.	.					.						.	.	.	.	.									.																													.	.	.	.	.	.
Template Conservation																			.	.	.	.	.					.						.	.	.	.	.																																						.	.	.	.	.	.
Template Sequence		Q	D	V	I	X	K	L	N	D	F	W	A	S	K	G	C	L	.	.	.	.	.	L	E	Q	P	.	Y	D	X	E	V	.	.	.	.	.	G	A	G	T	F	H	P	A	T	F	F	G	S	L	R	K	G	P	W	K	V	A	Y	V	Q	P	S	R	R	P	T	E	N	P	N	R	L	.	.	.	.	.	.
Template Known Secondary structure															T	T			.	.	.	.	.					.		S	S			.	.	.	.	.	S	S	G	G	G	S					T	G	G	G		S	S																	T	T			.	.	.	.	.	.
Template Predicted Secondary structure																			.	.	.	.	.					.						.	.	.	.	.																																						.	.	.	.	.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20						.	.	.	.		.	.	.	.	.						30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	R	H	H	T	F	F	E	M	L	G	N	F	S	F	G	D	Y	F	K	H	D	A	I	Q	F	A	W	E	L	L	T	S	E	K	W	F	A	L	P	K	E	R	L	W	V	T	V	Y	E	S	D	D	E	A	Y	E	I	W	E	K	E	V	G	I	P	R	E	R	I	I	R	I	G	D	N	K	G	A	P
Query Conservation
Alig confidence		.																				.	.	.	.									.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.																				.	.	.	.									.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	Q	R	Y	F	Q	Y	Q	V	I	I	K	P	S	P	E	N	S	Q	E	.	.	.	.	L	Y	L	E	S	L	E	Y	.	.	.	.	L	G	I	N	L	K	E	H	D	I	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		.	S											S			S	S				.	.	.	.									.	.	.	.	T	T			T	T	T	S				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure		.																				.	.	.	.									.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
			72	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90					.	.	.	.	.	.	.	.					.	100	.	.	.	.	.	.	.	.	.
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	A	S	D	N	F	W	Q	M	G	D	T	G	P	C	G	P	C	T	E	I	F	Y	D	H	G	D	H	I	W	G	G	P	P	G	S	P	E	E	D	G	D	R	Y	I	E	I	W	N	I	V	F	M	Q	F	N	R	Q	A	D	G	T	M	E	P	L	P	K	P	S	V	D	T	G	M	G	L	E	R	I
Query Conservation
Alig confidence		.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.
Template Conservation		.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.
Template Sequence		.	F	V	E	D	N	W	E	S	P	T	L	G	A	W	G	V	G	W	E	V	W	L	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	X	E	I	T	Q	F	T	Y	F	Q	Q	.	.	.	.	.	I	G	G	I	S	L	K	D	I	P	L	E	I	T	Y	G	L	E	R	I
Template Known Secondary structure		.									G	G	G	T											T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T												.	.	.	.	.	B	T	T	B			S	S
Template Predicted Secondary structure		.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.
Template SS confidence
			110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.																				.	.	.	.	.	.	.	140	.	.	.	.						.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
		245	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.					.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.																													280	.	.	.	.	.	.	.	.	.	290	.	.
Predicted Secondary structure																					.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																					.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	A	V	L	Q	H	V	N	S	N	Y	D	I	D	L	F	R	T	L	.	.	.	.	I	Q	A	V	A	K	V	T	G	A	T	D	L	S	N	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	L	R	V	I	A	D	H	I	R	S	C	A
Query Conservation																					.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																					.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	X	Y	L	Q	G	V	D	N	V	Y	E	V	Q	W	N	E	N	V	K	Y	G	D	V	F	L	E	N	E	R	E	F	S	V	F	N	F	E	E	A	N	V	G	L	L	F	R	H	F	D	E	Y	E	K	E	F	Y	R	L	V	E	K	N	L	Y	L	P	A	Y	D	Y	I	L	K	C	S	H	T	F	N
Template Known Secondary structure							T		S	S	G	G	G					T	T																				T	T	S																						T	T
Template Predicted Secondary structure
Template SS confidence
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.
		293	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	L	I	A	D	G	V	M	P	S	N	E	N	R	G	Y	V	L	R	R	I	I	R	R	A	V	R	H	G	N	M	L	G	A
Query Conservation
Alig confidence																					.	.
Template Conservation																					.	.
Template Sequence		L	L	D	A	R	G	A	I	S	V	S	Q	R	Q	T	Y	V	K	R	.	.	I	Q	A	X	A	R	K	A	A	R	V	F	L
Template Known Secondary structure						T	T														.	.
Template Predicted Secondary structure																					.	.
Template SS confidence
		245	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.			.	.	.	.	.	.	270	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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