Job Description P00957 Confidence 63.74% Date Thu Jan 5 10:57:20 GMT 2012 Rank 47 Aligned Residues 197 % Identity 15% Template c3rrkA_ PDB info PDB header:proton transport Chain: A: PDB Molecule:v-type atpase 116 kda subunit; PDBTitle: crystal structure of the cytoplasmic n-terminal domain of subunit i,2 homolog of subunit a, of v-atpase Resolution 2.64 Å

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		671	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.																		.	.	.	.	.	730	.	.	.
Predicted Secondary structure																																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	S	R	T	G	D	I	G	L	F	R	I	I	S	E	S	G	T	A	A	G	V	R	R	I	E	A	V	T	G	E	G	A	I	A	T	V	H	A	D	S	D	R	L	S	E	V	A	H	L	L	K	G	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	N	N	L	A	D	K	V	R
Query Conservation																																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	A	E	L	Q	K	A	G	V	V	H	I	D	P	L	R	P	D	E	L	G	E	Y	R	L	S	P	T	E	E	A	E	L	K	R	W	E	A	V	V	S	Q	A	E	Q	S	L	T	V	V	G	L	A	T	V	P	S	S	K	P	F	T	G	S	L	E	E	A	E	A	V	L	R	P	V	A	S	R	A	E
Template Known Secondary structure									T									G	G	G	G	G	G	G																												T							S	S				S
Template Predicted Secondary structure
Template SS confidence
		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.
		734	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.		.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.
Predicted Secondary structure																										.
Query SS confidence																										.
Query Sequence		S	V	L	E	R	T	R	Q	L	E	K	E	L	Q	Q	L	K	E	Q	A	A	A	Q	E	.	S	A	N	L	S	S	K	A	I	D	V	N	G	V	K	L	L	V	S	E	L	S	G	V	E	P	K	M	L	R	T	M	V	D	D	L	K	N	Q	L	G	S	T	I	I	V	L	A	T	V	V	E	G	K	V
Query Conservation																										.
Alig confidence																										.																							.	.
Template Conservation																																																	.	.
Template Sequence		V	L	G	K	E	R	A	A	L	E	E	E	I	Q	T	I	E	L	F	G	K	A	A	E	K	L	A	A	L	A	H	G	L	D	E	S	P	R	L	G	V	I	P	F	L	V	A	.	.	K	P	E	E	L	E	A	V	R	K	A	L	Q	E	A	L	A	D	R	F	V	L	E	A	E	P	L	E	N	Q	L
Template Known Secondary structure																															T	T	T	T	T	T		T	T									S	.	.																	T	T	S									S	S	S
Template Predicted Secondary structure																																																	.	.
Template SS confidence
		97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.			.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.
		813	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.									.	.	.	.	.		.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.
Predicted Secondary structure																															.	.	.	.	.	.	.	.						.
Query SS confidence																															.	.	.	.	.	.	.	.						.
Query Sequence		S	L	I	A	G	V	S	K	D	V	T	D	R	V	K	A	G	E	L	I	G	M	V	A	Q	Q	V	G	G	.	.	.	.	.	.	.	.	K	G	G	G	R	.	P	D	M	A	Q	A	G	G	T	D	A	A	A	L	P	A	A	L	A	S	V	K	G	W	V	S	A	K	L
Query Conservation																															.	.	.	.	.	.	.	.						.
Alig confidence												.	.	.	.	.	.														.	.	.	.	.	.	.	.						.
Template Conservation												.	.	.	.	.	.
Template Sequence		A	A	L	V	V	V	K	R	S	E	.	.	.	.	.	.	L	E	A	A	R	S	S	L	S	R	L	G	L	A	E	L	R	F	P	G	A	Y	G	A	M	P	L	G	K	A	A	A	R	M	K	E	R	A	R	L	A	P	E	E	L	V	G	I	R	E	E	V	A	R	L	S
Template Known Secondary structure									G	G	G	.	.	.	.	.	.										T	T	T			B					G	G	G	G	G	S
Template Predicted Secondary structure												.	.	.	.	.	.
Template SS confidence
		175	.	.	.	.	180	.	.	.	.							.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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