Job Description P00957 Confidence 100.00% Date Thu Jan 5 10:57:20 GMT 2012 Rank 7 Aligned Residues 219 % Identity 23% Template c3rf1B_ PDB info PDB header:ligase Chain: B: PDB Molecule:glycyl-trna synthetase alpha subunit; PDBTitle: the crystal structure of glycyl-trna synthetase subunit alpha from2 campylobacter jejuni subsp. jejuni nctc 11168 Resolution 2.20 Å

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		64	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.							130	.	.	.	.	.	.	.
Predicted Secondary structure																																																																				.	.	.	.	.	.
Query SS confidence																																																																				.	.	.	.	.	.
Query Sequence		T	S	Q	R	C	V	R	A	G	G	K	H	N	D	L	E	N	V	G	Y	T	A	R	H	H	T	F	F	E	M	L	G	N	F	S	F	G	D	Y	F	K	H	D	A	I	Q	F	A	W	E	L	L	T	S	E	K	W	F	A	L	P	K	E	R	L	W	.	.	.	.	.	.	V	T	V	Y	E	S	D	D
Query Conservation																																																																				.	.	.	.	.	.
Alig confidence									.	.																																									.	.	.	.	.	.												.	.	.	.	.	.
Template Conservation									.	.																																									.	.	.	.	.	.
Template Sequence		Q	E	Q	G	C	A	I	.	.	X	Q	P	Y	D	X	P	A	G	A	G	T	F	H	P	A	T	F	L	R	S	L	G	K	K	P	W	A	A	A	Y	V	A	P	S	R	R	P	T	D	.	.	.	.	.	.	G	R	Y	G	E	N	P	N	R	L	G	A	Y	Y	Q	F	Q	V	L	I	K	P	S	P	D
Template Known Secondary structure				T	T				.	.					S	S			S	S	G	G	G	S					T	T	T	S	S	S														G	G	G	.	.	.	.	.	.			T	T	T		S	S			S											S			S
Template Predicted Secondary structure									.	.																																									.	.	.	.	.	.
Template SS confidence
		15	.	.	.	.	20	.			.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.							.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
		138	.	140	.	.	.	.	.	.	.				.	.		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.
Predicted Secondary structure												.	.	.			.
Query SS confidence												.	.	.			.
Query Sequence		E	A	Y	E	I	W	E	K	E	V	.	.	.	G	I	.	P	R	E	R	I	I	R	I	G	D	N	K	G	A	P	Y	A	S	D	N	F	W	Q	M	G	D	T	G	P	C	G	P	C	T	E	I	F	Y	D	H	G	D	H	I	W	G	G	P	P	G	S	P	E	E	D	G	D	R	Y	I	E	I	W	N
Query Conservation												.	.	.			.
Alig confidence												.	.	.			.									.	.	.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																										.	.	.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		N	I	Q	E	L	Y	L	K	S	L	E	N	L	G	F	D	L	K	S	H	D	I	R	F	.	.	.	.	.	.	.	.	.	V	E	D	N	W	E	S	P	S	L	G	A	W	G	L	G	W	E	V	W	L	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	X	E	V	T	Q
Template Known Secondary structure		T													T			S	S	S	S					.	.	.	.	.	.	.	.	.								T	T	T	T											T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T
Template Predicted Secondary structure																										.	.	.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110										.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.																				.	.	.	.	.	.
		214	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.
Predicted Secondary structure																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	V	F	M	Q	F	N	R	Q	A	D	G	T	M	E	P	L	P	K	P	S	V	D	T	G	M	G	L	E	R	I	A	A	V	L	Q	H	V	N	S	N	Y	D	I	D	L	F	R	T	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence								.	.	.	.	.																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation								.	.	.	.	.
Template Sequence		F	T	Y	F	Q	Q	.	.	.	.	.	V	G	G	I	A	V	D	L	V	S	A	E	I	T	Y	G	L	E	R	I	A	X	Y	L	Q	N	V	D	N	V	Y	D	I	V	W	S	E	F	N	G	E	K	I	K	Y	A	D	V	H	K	Q	S	E	Y	E	F	S	K	Y	N	F	E	V	S	D	V	K	I	L
Template Known Secondary structure								.	.	.	.	.		T	T				S	S																		T		S	S	S	T	T	S						T	T																							T
Template Predicted Secondary structure								.	.	.	.	.
Template SS confidence
		139	140	.	.	.	.						.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.
								264	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.			310	.	.	.	.	.	.	.	.	.	320	.	.	.
Predicted Secondary structure		.	.	.	.	.	.																																															.	.
Query SS confidence		.	.	.	.	.	.																																															.	.
Query Sequence		.	.	.	.	.	.	I	Q	A	V	A	K	V	T	G	A	T	D	L	S	N	K	S	L	R	V	I	A	D	H	I	R	S	C	A	F	L	I	A	D	G	V	M	P	S	N	E	N	R	G	Y	V	.	.	L	R	R	I	I	R	R	A	V	R	H	G	N	M
Query Conservation		.	.	.	.	.	.																																															.	.
Alig confidence		.	.	.	.	.	.																																															.	.
Template Conservation
Template Sequence		N	E	Q	F	E	N	S	Y	K	E	C	K	N	I	L	E	Q	G	L	A	L	P	A	Y	D	Y	C	X	L	A	A	H	T	F	N	L	L	D	A	R	G	A	I	S	V	A	Q	R	Q	D	Y	X	L	K	I	R	E	L	S	K	N	C	A	E	I	Y	K	K
Template Known Secondary structure																		T	T																							T				S	S	T
Template Predicted Secondary structure
Template SS confidence
		214	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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