Return to main results Retrieve Phyre Job Id

Job DescriptionP00957
Confidence23.63%DateThu Jan 5 10:57:20 GMT 2012
Rank129Aligned Residues110
% Identity9%Templatec3ptjA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:upf0603 protein at1g54780, chloroplastic; PDBTitle: structural and functional analysis of arabidopsis thaliana thylakoid2 lumen protein attlp18.3
Resolution2.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   755....760.........770.........780... ......790...... ...800.........810.........820......
Predicted Secondary structure 







........










Query SS confidence 




























.












. . . . . . .





























Query Sequence  AQESANLSSKAIDVNGVKLLVSELSGVEP. KMLRTMVDDLKNQ. . . . . . . LGSTIIVLATVVEGKVSLIAGVSKDVTDRV
Query Conservation        
   
  
     
       
 .  

  
  
   .......     


      
   
          
Alig confidence 




























.












.......


















..








Template Conservation     
   
  
       
 



            
  
   
  
      





    
   
 .. 
  

  
Template Sequence  KSDLKKLLSDLEYRKKXRLNFITVRKLTSKADAFEYADQVLEKWYPSXEEGNNKGIVVLITSQKEGAIT. . GGPAFIEAV
Template Known Secondary structure 

S

SSS

S
STTTTTT..
Template Predicted Secondary structure 

























..





Template SS confidence 















































































   112.......120.........130.........140.........150.........160.........170.........180 .........
 
   827..830.........840.........850.........860.........870....
Predicted Secondary structure 















Query SS confidence 















































Query Sequence  KAGELIGMVAQQVGGKGGGRPDMAQAGGTDAAALPAALASVKGWVSAK
Query Conservation   
  
 
 
    







  




     
 


  
   
   
Alig confidence 












......





..




















Template Conservation   
     
     ...... 
    ..  
  
       
   
   
Template Sequence  GENILDATVSENL. . . . . . PVLATD. . EKYNEAVYSSAKRLVAAIDGQ
Template Known Secondary structure 
T......T..T
TT
Template Predicted Secondary structure 
......
..




Template SS confidence 















































   190.........200.. ...... .210.........220.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions