Job Description P00957 Confidence 100.00% Date Thu Jan 5 10:57:20 GMT 2012 Rank 10 Aligned Residues 206 % Identity 30% Template c2e1bA_ PDB info PDB header:ligase, hydrolase Chain: A: PDB Molecule:216aa long hypothetical alanyl-trna synthetase; PDBTitle: crystal structure of the alax-m trans-editing enzyme from2 pyrococcus horikoshii Resolution 2.70 Å

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		454	.	.	.	.	.	460	.	.	.	.				.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.		.	.	.
Predicted Secondary structure													.	.	.																																																															.
Query SS confidence													.	.	.																																																															.
Query Sequence		S	A	S	E	F	K	G	Y	D	H	L	.	.	.	E	L	N	G	K	V	T	A	L	F	V	D	G	K	A	V	D	A	I	N	A	G	Q	E	A	V	V	V	L	D	Q	T	P	F	Y	A	E	S	G	G	Q	V	G	D	K	G	E	L	K	G	A	N	F	S	F	A	V	E	D	T	Q	K	.	Y	G	Q
Query Conservation													.	.	.																																																															.
Alig confidence													.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.											.
Template Conservation																													.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.
Template Sequence		N	M	T	R	K	L	Y	Y	E	D	A	Y	L	K	E	A	K	G	R	V	L	E	I	R	D	N	A	.	.	.	.	.	.	.	.	.	.	.	.	.	I	L	L	D	Q	T	I	F	Y	P	T	G	G	G	Q	P	H	D	R	G	T	I	.	.	.	.	N	G	V	E	V	L	D	V	Y	K	D	E	E	G
Template Known Secondary structure		S	S				S	T	T	S		T	T								B					S	S		.	.	.	.	.	.	.	.	.	.	.	.	.			B	S				S					T	T									.	.	.	.	T	T										T	T
Template Predicted Secondary structure																													.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.														30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.					.	.	.	.	.	.	.	.	60	.	.	.	.	.
		530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.		.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																										.
Query SS confidence																																																										.
Query Sequence		A	I	G	H	I	G	K	L	A	A	G	S	L	K	V	G	D	A	V	Q	A	D	V	D	E	A	R	R	A	R	I	R	L	N	H	S	A	T	H	L	M	H	A	A	L	R	Q	V	L	G	T	H	V	S	Q	K	.	G	S	L	V	N	D	K	V	L	R	F	D	F	S	H	N	E	A	M	K	P	E	E
Query Conservation																																																										.
Alig confidence									.																																																	.																							.
Template Conservation									.																																																																								.
Template Sequence		N	V	W	H	V	V	K	.	E	P	E	K	F	K	V	G	D	E	V	E	L	K	I	D	W	D	Y	R	Y	K	L	M	R	I	H	T	G	L	H	L	L	E	H	V	L	N	E	V	L	G	E	G	N	W	Q	L	V	G	S	G	M	S	V	E	K	G	R	Y	D	I	A	Y	P	E	N	L	N	K	Y	.
Template Known Secondary structure								S	.		G	G	G			S	S	S																																	T	T	T	S								B		S	S									S	S		G	G	G	G	.
Template Predicted Secondary structure									.																																																																								.
Template SS confidence
		66	.	.	.	70	.	.		.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.
		609	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	R	A	V	E	D	L	V	N	T	Q	I	R	R	N	L	P	I	E	T	N	I	M	D	L	E	A	A	K	A	K	G	A	M	A	L	F	G	E	K	Y	D	E	R	V	R	V	L	S	M	G	D	F	S	T	E	L	C	G	G	T	H	A	S	R	T	G	D	I	G	L	F	R	I	I	S	E	S	G	T
Query Conservation
Alig confidence																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	E	Q	I	I	S	L	F	N	K	Y	V	D	E	G	G	E	V	K	I	W	W	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	G	D	R	R	Y	T	Q	I	R	D	F	E	V	I	P	C	G	G	T	H	V	K	D	I	K	E	I	G	H	I	K	K	L	K	R	S	S	I
Template Known Secondary structure																		B						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S	S							T	T	S							S				S	B	G	G	G	T
Template Predicted Secondary structure																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		144	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.																				.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.
		689	690	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	A	G	V	R	R	I	E	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	R	G	K	Q	R	L	E	M
Template Known Secondary structure			T	T
Template Predicted Secondary structure
Template SS confidence
		205	.	.	.	.	210	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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