Job Description P00957 Confidence 99.91% Date Thu Jan 5 10:57:20 GMT 2012 Rank 18 Aligned Residues 217 % Identity 15% Template c1qf6A_ PDB info PDB header:ligase/rna Chain: A: PDB Molecule:threonyl-trna synthetase; PDBTitle: structure of e. coli threonyl-trna synthetase complexed with its2 cognate trna Resolution 2.90 Å

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		491	.	.		.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.
Predicted Secondary structure					.
Query SS confidence					.
Query Sequence		V	V	L	.	D	Q	T	P	F	Y	A	E	S	G	G	Q	V	G	D	K	G	E	L	K	G	A	N	F	S	F	A	V	E	D	T	Q	K	Y	G	Q	A	I	G	H	I	G	K	L	A	A	G	S	L	K	V	G	D	A	V	Q	A	D	V	D	E	A	R	R	A	R	I	R	L	N	H	S	A	T	H	L
Query Conservation					.
Alig confidence					.																																.									.	.	.	.
Template Conservation																																					.									.	.	.	.
Template Sequence		I	T	L	P	D	G	S	Q	R	H	Y	D	H	A	V	S	P	M	D	V	A	L	D	I	G	P	G	L	A	K	A	C	I	A	G	.	R	V	N	G	E	L	V	D	.	.	.	.	A	C	D	L	I	E	N	D	A	Q	L	S	I	I	T	A	K	D	E	E	G	L	E	I	I	R	H	S	C	A	H	L
Template Known Secondary structure					T	T	S						S	S		B																		S			.			T	T					.	.	.	.	T	T	S		B		S									T	T	S
Template Predicted Secondary structure																																					.									.	.	.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.		.	40	.	.	.	.	.	.					.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
		570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	H	A	A	L	R	Q	V	L	G	T	H	V	S	Q	K	G	S	L	V	N	D	K	V	L	R	F	D	F	S	H	N	E	A	M	K	P	E	E	I	R	A	V	E	D	L	V	N	T	Q	I	R	R	N	L	P	I	E	T	N	I	M	D	L	E	A	A	K	A	K	G	A	M	A	L	F	G	E	K	Y
Query Conservation
Alig confidence																							.																																																	.	.
Template Conservation																							.																																																	.	.
Template Sequence		L	G	H	A	I	K	Q	L	W	P	H	T	K	M	A	I	G	P	V	I	D	.	N	G	F	Y	Y	D	V	D	L	D	R	T	L	T	Q	E	D	V	E	A	L	E	K	R	M	H	E	L	A	E	K	N	Y	D	V	I	K	K	K	V	S	W	H	E	A	R	E	T	.	.	F	A	N	R	G	E	S	Y
Template Known Secondary structure											T	T										T	.	T									S	S																					T		B															.	.					T
Template Predicted Secondary structure																							.																																																	.	.
Template SS confidence
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.			.	.	150	.	.	.	.	.
													650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.								.	.	.	.	690	.	.	.	.	.	.	.	.	.			700	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.																																					.	.	.	.	.	.	.															.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.																																					.	.	.	.	.	.	.															.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	D	E	R	V	R	V	L	S	M	G	D	F	S	T	E	L	C	G	G	T	H	A	S	R	T	G	D	I	G	L	F	R	I	I	S	E	.	.	.	.	.	.	.	S	G	T	A	A	G	V	R	R	I	E	A	V	T	.	.	G	E	G	A	I	A	T	V	H	A
Query Conservation		.	.	.	.	.	.	.	.	.	.	.																																					.	.	.	.	.	.	.															.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.													.																								.	.	.	.	.	.	.															.	.
Template Conservation																									.
Template Sequence		K	V	S	I	L	D	E	N	I	A	H	D	D	K	P	G	L	Y	F	H	E	E	Y	.	V	D	M	C	R	G	P	H	V	P	N	M	R	F	C	H	H	F	K	L	M	K	T	A	G	A	Y	W	R	G	D	S	N	N	K	M	L	Q	R	I	Y	G	T	A	W	A	D	K	K	A	L	N	A	Y	L	Q
Template Known Secondary structure										S		T	T									T	T		.					S	S				S	B	G	G	G			S											G	G	G		T	T	S												S	S
Template Predicted Secondary structure																									.
Template SS confidence
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.		.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
		710	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	S	D	R	L	S	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	L	E	E	A	A	K
Template Known Secondary structure								T
Template Predicted Secondary structure
Template SS confidence
		235	.	.	.	.	240	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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