Return to main results Retrieve Phyre Job Id

Job DescriptionP77460
Confidence99.63%DateThu Jan 5 12:29:28 GMT 2012
Rank135Aligned Residues112
% Identity20%Templated1p91a_
SCOP infoS-adenosyl-L-methionine-dependent methyltransferases S-adenosyl-L-methionine-dependent methyltransferases rRNA methyltransferase RlmA
Resolution2.80

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   12.......20..... ....30.........40..... ....50.........60.........70.........80.....
Predicted Secondary structure 


...










...




















Query SS confidence 













. . .



















. . .







































Query Sequence  PTKEHLLPHFLEHL. . . GNNHLDIGVGTGFYLTHVPE. . . SSLISLMDLNEASLNAASTRAGESKIKHKISHDVFEPYPA
Query Conservation       

       ...
 









        ...      

        
                       
Alig confidence 













...



















...



















.....














Template Conservation   
       
          






 
     
            
 
      
   .....             

Template Sequence  PLRDAIVAQLRERLDDKATAVLDIGCGEGYYTHAFADALPEITTFGLDVSKVAIKAAAKR. . . . . YPQVTFCVASSHRLP
Template Known Secondary structure  S
TT

T
TTSTTT
TTSS
.....
TTS

TTS
S
Template Predicted Secondary structure 



























.....








Template SS confidence 















































































   6970.........80.........90.........100.........110.........120........ .130.........140...
 
   86...90.........100.........110.........120.........130.........
Predicted Secondary structure 






















Query SS confidence 





















































Query Sequence  ALHGQFDSISMSYLLHCLPGNISTKSCVIRNAAQALTDDGTLYGATILGDGVVH
Query Conservation        
 
                   
  
 
 




 
            
Alig confidence 
















...........

























Template Conservation    
 


 
        ...........  
  






 
    
       
Template Sequence  FSDTSXDAIIRIYAPCK. . . . . . . . . . . AEELARVVKPGGWVITATPGPRHLXE
Template Known Secondary structure  B
TT
S



...........
TTTT
Template Predicted Secondary structure 








...........









Template SS confidence 





















































   144.....150.........160 .........170.........180......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions