Job Description P77460 Confidence 99.79% Date Thu Jan 5 12:29:28 GMT 2012 Rank 64 Aligned Residues 182 % Identity 17% Template c3dp7B_ PDB info PDB header:transferase Chain: B: PDB Molecule:sam-dependent methyltransferase; PDBTitle: crystal structure of sam-dependent methyltransferase from bacteroides2 vulgatus atcc 8482 Resolution 2.33 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.				.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
Predicted Secondary structure																																							.	.	.
Query SS confidence																																							.	.	.
Query Sequence		A	W	G	C	P	T	K	E	H	L	L	P	H	F	L	E	H	L	G	N	N	H	L	D	I	G	V	G	T	G	F	Y	L	T	H	V	P	.	.	.	E	S	S	L	I	S	L	M	D	L	N	E	A	S	L	N	A	A	S	T	R	A	G	E	S	K	I	K	H	K	I	S	H	D	V	F	E	P	Y	P
Query Conservation																																							.	.	.
Alig confidence																																							.	.	.											.
Template Conservation																																																				.
Template Sequence		F	Y	S	D	Q	S	F	G	K	A	L	E	I	V	F	S	H	H	P	K	R	L	L	D	I	G	G	N	T	G	K	W	A	T	Q	C	V	Q	Y	N	K	E	V	E	V	T	I	V	D	L	.	P	Q	Q	L	E	M	M	R	K	Q	T	A	G	L	S	G	S	E	R	I	H	G	H	G	A	N	L	L	D
Template Known Secondary structure			T	S		S											T	T			S						T		T	T												S	S									.											T	T	T		T	T	G	G	G								S	S
Template Predicted Secondary structure																																																				.
Template SS confidence
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.		.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
		85	.	.	.			.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150				.	.	.	.	.	.	.	.	.
Predicted Secondary structure						.	.																																																															.	.	.
Query SS confidence						.	.																																																															.	.	.
Query Sequence		A	A	L	H	.	.	G	Q	F	D	S	I	S	M	S	Y	L	L	H	C	L	P	G	N	I	S	T	K	S	C	V	I	R	N	A	A	Q	A	L	T	D	D	G	T	L	Y	G	A	T	I	L	G	D	G	V	V	H	N	S	F	G	Q	K	L	M	R	I	Y	.	.	.	N	Q	K	G	I	F	S	N	T
Query Conservation						.	.																																																															.	.	.
Alig confidence						.	.																.	.																																														.	.	.
Template Conservation																							.	.
Template Sequence		R	D	V	P	F	P	T	G	F	D	A	V	W	M	S	Q	F	L	D	C	F	.	.	S	E	E	E	V	I	S	I	L	T	R	V	A	Q	S	I	G	K	D	S	K	V	Y	I	M	E	T	L	W	D	R	Q	R	Y	E	T	A	S	Y	C	L	T	Q	I	S	L	Y	F	T	A	M	A	N	G	N	S	K
Template Known Secondary structure		T	T	S							S						S		S	T	T	S	.	.														T	T			T	T										G	G	G		S	S																	T	S		S	S
Template Predicted Secondary structure																							.	.
Template SS confidence
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.			.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.
		160	.	.	.	.	.	.	.	.	.	170	.		.	.	.	.	.	.	.	.	180	.	.				.	.	.	.	.	.	.	190	.	.
Predicted Secondary structure														.												.	.	.
Query SS confidence														.												.	.	.
Query Sequence		K	D	S	E	E	G	L	T	H	I	L	S	.	E	H	F	E	N	V	K	T	K	V	Q	.	.	.	G	T	V	V	M	F	S	A	S	G
Query Conservation														.												.	.	.
Alig confidence														.												.	.	.
Template Conservation
Template Sequence		M	F	H	S	D	D	L	I	R	C	I	E	N	A	G	L	E	V	E	E	I	Q	D	N	I	G	L	G	H	S	I	L	Q	C	R	L	K
Template Known Secondary structure		S													T	T											T	T	T
Template Predicted Secondary structure
Template SS confidence
		319	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions