Job Description P77460 Confidence 99.08% Date Thu Jan 5 12:29:28 GMT 2012 Rank 227 Aligned Residues 142 % Identity 16% Template c3adnB_ PDB info PDB header:transferase Chain: B: PDB Molecule:spermidine synthase; PDBTitle: crystal structure of spermidine synthase from e. coli. Resolution 2.90 Å

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		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.				.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.
Predicted Secondary structure																																.	.	.
Query SS confidence																																.	.	.
Query Sequence		L	P	H	F	L	E	H	L	G	N	N	H	L	D	I	G	V	G	T	G	F	Y	L	T	H	V	P	E	S	S	.	.	.	L	I	S	L	M	D	L	N	E	A	S	L	N	A	A	S	T	R	A	G	E	S	K	I	K	H	K	I	S	H	D	V	F	E	P	Y	P	A	A	L	H	G	Q	F	D	S	I
Query Conservation																																.	.	.
Alig confidence																																.	.	.
Template Conservation
Template Sequence		V	P	L	L	A	H	G	H	A	K	H	V	L	I	I	G	G	G	D	G	A	M	L	R	E	V	T	R	H	K	N	V	E	S	I	T	M	V	E	I	D	A	G	V	V	S	F	C	R	Q	Y	L	P	N	H	N	A	G	S	Y	D	D	P	R	F	K	L	V	I	V	N	Q	T	S	Q	T	F	D	V	I
Template Known Secondary structure							S	S									S			S	S							T	T		T	T									S												S					T	T		T	T		T	T									T	T
Template Predicted Secondary structure
Template SS confidence
		70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.
		95	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	M	S	Y	L	L	H	C	L	P	G	N	I	S	T	K	S	C	V	I	R	N	A	A	Q	A	L	T	D	D	G	T	L	Y	G	A	T	I	L	G	D	G	V	V	H	N	S	F	G	Q	K	L	M	R	I	Y	N	Q	K	G	I	F	S	N	T	K	D	S	E	E	G	L	T	H	I	L	S	E	H	F
Query Conservation
Alig confidence									.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation									.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	S	D	C	T	S	A	.	.	.	.	.	.	.	.	.	.	.	F	Y	E	G	C	K	R	C	L	N	P	G	G	I	F	V	A	Q	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	V	C	F	L	Q	Q	E	E	A	I	D	S	H	R	K	L	S	H	Y	F
Template Known Secondary structure							T	T	.	.	.	.	.	.	.	.	.	.	.								T												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				S	S														T	T
Template Predicted Secondary structure									.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		156	.	.	.	160	.	.												.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.																							.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.
		175	.	.	.	.	180	.	.								.	.	.	.	.	.	.	190	.	.
Predicted Secondary structure										.	.	.	.	.	.	.
Query SS confidence										.	.	.	.	.	.	.
Query Sequence		E	N	V	K	T	K	V	Q	.	.	.	.	.	.	.	G	T	V	V	M	F	S	A	S	G
Query Conservation										.	.	.	.	.	.	.
Alig confidence										.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	D	V	G	F	Y	Q	A	A	I	P	T	Y	Y	G	G	I	M	T	F	A	W	A	T	D
Template Known Secondary structure		S										T	T	S	S	S	S									S
Template Predicted Secondary structure
Template SS confidence
		214	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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