Job Description P77460 Confidence 43.38% Date Thu Jan 5 12:29:28 GMT 2012 Rank 378 Aligned Residues 174 % Identity 12% Template c2zwaA_ PDB info PDB header:transferase Chain: A: PDB Molecule:leucine carboxyl methyltransferase 2; PDBTitle: crystal structure of trna wybutosine synthesizing enzyme2 tyw4 Resolution 1.70 Å

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		3	.	.	.	.	.	.		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.					.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.										.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.
Predicted Secondary structure									.																				.	.	.	.																			.	.	.	.	.	.	.	.	.
Query SS confidence									.																				.	.	.	.																			.	.	.	.	.	.	.	.	.
Query Sequence		V	S	N	R	L	A	W	.	G	C	P	T	K	E	H	L	L	P	H	F	L	E	H	L	G	N	N	.	.	.	.	H	L	D	I	G	V	G	T	G	F	Y	L	T	H	V	P	E	S	.	.	.	.	.	.	.	.	.	S	L	I	S	L	M	D	L	N	E	A	S	L	N	A	A	S	T	R	A	G	E
Query Conservation									.																				.	.	.	.																			.	.	.	.	.	.	.	.	.
Alig confidence									.																				.	.	.	.																			.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		C	I	N	R	G	Y	W	L	R	L	F	A	I	R	S	R	L	N	S	I	I	E	Q	T	P	Q	D	K	K	I	V	V	V	N	L	G	C	G	Y	D	P	L	P	F	Q	L	L	D	T	N	N	I	Q	S	Q	Q	Y	H	D	R	V	S	F	I	D	I	D	Y	S	D	L	L	K	I	K	I	E	L	I	K
Template Known Secondary structure																									S		T	T	S								T		T	T										T	T		G	G	G	G	G	G	S	S	S
Template Predicted Secondary structure
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
		69	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.																																					.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.
Predicted Secondary structure																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		S	K	I	K	H	K	I	S	H	D	V	F	E	P	Y	P	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	L	H	G	Q	F	D	S	I	S	M	S	Y	L	L	H	C	L	P	G	N	I	S	T	K	S	C
Query Conservation																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.
Template Conservation																																																																									.	.
Template Sequence		T	I	P	E	L	S	K	I	I	G	L	S	E	D	K	D	Y	V	D	D	S	N	V	D	F	L	T	T	P	K	Y	L	A	R	P	C	D	L	N	D	S	K	M	F	S	T	L	L	N	E	C	Q	L	Y	D	P	N	V	V	K	V	F	V	A	E	V	S	L	A	Y	M	.	.	K	P	E	R	S	D	S
Template Known Secondary structure										T	T			S	S		S	S		S		T	T							S	S								T	T												T	T	T	T		T	T									S	S	G	G	G	S	.	.
Template Predicted Secondary structure																																																																									.	.
Template SS confidence
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230			.	.	.	.	.	.	.
		113	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.				.	.	160	.	.	.	.	.	.	.	.	.	170	.		.	.	.	.	.	.	.	.	180
Predicted Secondary structure																																															.	.	.															.
Query SS confidence																																															.	.	.															.
Query Sequence		V	I	R	N	A	A	Q	A	L	T	D	D	G	T	L	Y	G	A	T	I	L	G	D	G	V	V	H	N	S	F	G	Q	K	L	M	R	I	Y	N	Q	K	G	I	F	S	.	.	.	N	T	K	D	S	E	E	G	L	T	H	I	L	S	.	E	H	F	E	N	V	K	T	K
Query Conservation																																															.	.	.															.
Alig confidence									.	.																																					.	.	.															.
Template Conservation									.	.
Template Sequence		I	I	E	A	T	S	K	.	.	M	E	N	S	H	F	I	I	L	E	Q	L	I	P	K	G	P	F	E	P	F	S	K	Q	M	L	A	H	F	K	R	N	D	S	P	L	Q	S	V	L	K	Y	N	T	I	E	S	Q	V	Q	R	F	N	K	L	G	F	A	Y	V	N	V	G
Template Known Secondary structure								T	.	.	S	S	S											T	T		T	T	S													T	T					G	G	G	T			S											T	T
Template Predicted Secondary structure									.	.
Template SS confidence
		238	.	240	.	.	.	.			.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions