Job Description P77460 Confidence 98.36% Date Thu Jan 5 12:29:28 GMT 2012 Rank 271 Aligned Residues 156 % Identity 15% Template c2nyuA_ PDB info PDB header:transferase Chain: A: PDB Molecule:putative ribosomal rna methyltransferase 2; PDBTitle: crystal structure of human ftsj homolog 2 (e.coli) protein2 in complex with s-adenosylmethionine Resolution 1.76 Å

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		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.					.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.											.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.
Predicted Secondary structure																	.	.	.	.																								.	.	.	.	.	.	.	.	.	.
Query SS confidence																	.	.	.	.																								.	.	.	.	.	.	.	.	.	.
Query Sequence		W	G	C	P	T	K	E	H	L	L	P	H	F	L	E	.	.	.	.	H	L	G	N	N	H	L	D	I	G	V	G	T	G	F	Y	L	T	H	V	P	E	S	.	.	.	.	.	.	.	.	.	.	S	L	I	S	L	M	D	L	N	E	A	S	L	N	A	A	S	T	R	A	G	E	S	K	I	K	H	K
Query Conservation																	.	.	.	.																								.	.	.	.	.	.	.	.	.	.
Alig confidence																	.	.	.	.																								.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Y	R	S	R	S	A	F	K	L	L	E	V	N	E	R	H	Q	I	L	R	P	G	L	R	V	L	D	C	G	A	A	P	G	A	W	S	Q	V	A	V	Q	K	V	N	A	A	G	T	D	P	S	S	P	V	G	F	V	L	G	V	D	L	L	H	I	F	P	L	E	G	A	T	F	L	C	P	A	D	V	T
Template Known Secondary structure			S	S	T																	T	T							T			S											T	T	T	T				T	T	S										S	S						T	T						S			T	T
Template Predicted Secondary structure
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.								.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.
Predicted Secondary structure																																									.	.	.	.	.	.	.
Query SS confidence																																									.	.	.	.	.	.	.
Query Sequence		I	S	H	D	V	F	E	P	Y	P	A	A	L	H	G	Q	F	D	S	I	S	M	S	Y	L	L	H	C	L	P	G	N	I	S	T	K	S	C	V	.	.	.	.	.	.	.	I	R	N	A	A	Q	A	L	T	D	D	G	T	L	Y	G	A	T	I	L	G	D	G	V	V	H	N	S	F	G	Q	K	L	M
Query Conservation																																									.	.	.	.	.	.	.
Alig confidence																																									.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	P	R	T	S	Q	R	I	L	E	V	L	P	G	R	R	A	D	V	I	L	S	D	M	A	P	N	A	T	G	F	R	D	L	D	H	D	R	L	I	S	L	C	L	T	L	L	S	V	T	P	D	I	L	Q	P	G	G	T	F	L	C	K	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		S											S	G	G	G															S																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.
		148	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	I	Y	N	Q	K	G	I	F	S	N	T	K	D	S	E	E	G	L	T	H	I	L	S	E	H	F	E	N	V	K	T	K	V	Q	G	T	V	V	M	F	S	A	S	G
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.																										.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.																										.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	W	A	G	S	Q	S	R	R	L	Q	R	R	L	T	E	E	F	Q	N	V	R	I	I	K	P	.	.	E	V	Y	F	L	A	T	Q
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.			S	G	G	G																				.	.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.																										.	.
Template SS confidence
												146	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170			.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions