Job Description P77460 Confidence 99.85% Date Thu Jan 5 12:29:28 GMT 2012 Rank 36 Aligned Residues 167 % Identity 20% Template c2iipD_ PDB info PDB header:transferase Chain: D: PDB Molecule:nicotinamide n-methyltransferase; PDBTitle: human nicotinamide n-methyltransferase Resolution 2.05 Å

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		15	.	.	.	.	20	.	.	.	.			.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.			.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Predicted Secondary structure												.	.																								.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence												.	.																								.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	H	L	L	P	H	F	L	E	H	.	.	L	G	N	N	H	L	D	I	G	V	G	T	G	F	Y	L	T	H	V	P	E	S	S	.	.	L	I	S	L	M	D	L	N	E	A	S	L	N	A	A	S	T	R	A	G	E	S	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation												.	.																								.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence												.	.																								.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	N	L	F	K	I	F	C	L	D	G	V	K	G	D	L	L	I	D	I	G	S	G	P	T	I	Y	Q	L	L	S	A	C	E	S	F	K	E	I	V	V	T	D	Y	S	D	Q	N	L	Q	E	L	E	K	W	L	K	A	A	P	A	A	F	D	W	S	P	V	V	T	Y	V	C	D	L	E	G	N	R	V
Template Known Secondary structure										T	S										S	S		T	T			G	G	G	T	T													S													T	T		T	T	S														T	T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		43	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.
																71	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	K	H	K	I	S	H	D	V	F	E	P	Y	P	A	A	L	H	G	Q	F	D	S	I	S	M	S	Y	L	L	H	C	L	P	G	N	I	S	T	K	S	C	V	I	R	N	A	A	Q	A	L	T	D	D	G	T	L	Y	G	A	T	I	L	G	D	G
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	G	P	E	K	E	E	K	L	R	Q	A	V	K	Q	V	L	K	C	D	V	T	Q	S	Q	P	L	G	A	V	P	L	P	P	A	D	C	V	L	S	T	L	C	L	D	A	A	C	P	D	L	P	T	Y	C	R	A	L	R	N	L	G	S	L	L	K	P	G	G	F	L	V	I	M	D	A	L	K	S	S
Template Known Secondary structure																						T	T	S	S	S	T	T	T	T													S							S	S													T	T													S	S
Template Predicted Secondary structure
Template SS confidence
		123	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.
		137	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.		.	.	.	.	.	.	.	.	180	.	.	.												.	.	.	.	.	.	190	.	.
Predicted Secondary structure																																					.													.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																					.													.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	V	H	N	S	F	G	Q	K	L	M	R	I	Y	N	Q	K	G	I	F	S	N	T	K	D	S	E	E	G	L	T	H	I	L	S	.	E	H	F	E	N	V	K	T	K	V	Q	G	.	.	.	.	.	.	.	.	.	.	.	T	V	V	M	F	S	A	S	G
Query Conservation																																					.													.	.	.	.	.	.	.	.	.	.	.
Alig confidence					.	.	.	.	.	.	.	.	.	.	.																						.													.	.	.	.	.	.	.	.	.	.	.
Template Conservation					.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Y	Y	M	.	.	.	.	.	.	.	.	.	.	.	I	G	E	Q	K	F	S	S	L	P	L	G	R	E	A	V	E	A	A	V	K	E	A	G	Y	T	I	E	W	F	E	V	I	S	Q	S	Y	S	S	T	M	A	N	N	E	G	L	F	S	L	V	A	R	K
Template Known Secondary structure					.	.	.	.	.	.	.	.	.	.	.		T	T																				T	T															T	T	T	B
Template Predicted Secondary structure					.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		203	.	.												.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions