 |
Job Description | P77460 | Confidence | 98.44% | Date | Thu Jan 5 12:29:28 GMT 2012 |
Rank | 267 | Aligned Residues | 90 |
% Identity | 14% | Template | c1m6yA_ |
PDB info |
PDB header:transferase | Chain: A: PDB Molecule:s-adenosyl-methyltransferase mraw; |
PDBTitle: crystal structure analysis of tm0872, a putative sam-2 dependent methyltransferase, complexed with sah
|
Resolution | 1.90 Å |
|
 |
  |   |
15 | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | |
|
|
. | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | |
|
|
|
. | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
| . | . | . |
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
|
|
Query Sequence |   |
E | H | L | L | P | H | F | L | E | H | L | G | N | N | H | L | D | I | G | V | G | T | G | F | Y | L | T | H | V | P | E | . |
. |
. |
S | S | L | I | S | L | M | D | L | N | E | A | S | L | N | A | A | S | T | R | A | G | E | S | K | I | K | H | K | I | S | H | D | V | F | E | P | Y | P | A | . |
. |
. |
. |
A | L |
Query Conservation |   |
  |   |
|
|   |   |   |   |   |   |   |
|   |
|
|
|
|
|
|
|
|
|
|   |   |   |   |   |   |   |   | . | . | . |   |   |   |   |   |   |
|
|   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   | . | . | . | . |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
Template Conservation |   |
  |
|
|
|   |   |
|   |   |   |   |
|   |   |
|
|
|   |
|   |
|   |
|
|
|
|   |   |
|
|   |   |   |
|   |   |   |
|
|
|
|
|   |
|   |   |
|
|   |   |
|   |   |   |
|   |   |   |
|   |
|
|   |   |   |   |   |
|
|   |   |
|   |   |   |
|   |   |   |   |
Template Sequence |   |
R | E | V | I | E | F | L | K | P | E | D | E | K | I | I | L | D | C | T | V | G | E | G | G | H | S | R | A | I | L | E | H | C | P | G | C | R | I | I | G | I | D | V | D | S | E | V | L | R | I | A | E | E | K | L | K | E | F | S | D | R | V | S | L | F | K | V | S | Y | R | E | A | D | F | L | L | K | T | L | G |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |
|
|
| T | T |
|  |  |  |  | T | T |
| T | T | S |  |  |  |  |  |  |  |  |  |
| T | T |
|  |  |  |  |  |  | S |
|  |  |  |  |  |  |  |  |  |  | T | G | G | G | T | T | T |  |  |  |  |  |
|
| G | G | G |  |  |  |  |  |  |  | T | T |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
14 | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . |
  |
  |   |
88 | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  |
|
|
|  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
H | G | Q | F | D | S | I | S | M | S | Y | L | L | H | C | L | P |
Query Conservation |   |
  |   |   |   |
|   |
|   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |
|
|
|
|
|   |
|
|
|
|
|
|   |
|
Template Sequence |   |
I | E | K | V | D | G | I | L | X | D | L | G | V | S | T | Y | Q |
Template Known Secondary structure |   |
| S |
|  |  |  |  |  |  |  |
| S |
|
|  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
94 | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|