|   |
4 | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | |
. | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |
| . |
|  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
Query Sequence |   |
L | N | V | D | K | L | S | V | H | F | G | D | E | S | A | P | F | R | A | V | D | R | . |
I | S | Y | S | V | K | Q | G | E | V | V | G | I | V | G | E | S | G | S | G | K | S | V | S | S | L | A | I | M | G | L | I | D | Y | P | G | R | V | M | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
Query Conservation |   |
|   |
|   |
|
|   |   |   |
|   |   |   |   |   |   |   |   |
|
|   |   | . |
|
|
|   |
|   |   |
|
|
|   |   |
|
|
|   |
|
|
|
|
|
|
|
|   |   |   |
|   |
|
|   |   |   |   |   |   |   |   | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
Alig confidence |   |
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
| . |
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
Template Conservation |   |
|   |
|   |
|
| . | . | . | . | . | . | . | . | . | . | . |
|   |   |   |   |   |   |   |
|   |
|   |   |   | . |
|   |
|
|   |
|   |
|
|
|
|
|
|
|
|
|   |
|
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
Template Sequence |   |
L | Y | L | K | G | F | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
K | S | F | G | R | P | S | L | I | G | F | S | D | R | . |
V | T | A | I | V | G | P | N | G | S | G | K | S | N | I | I | D | A | I | K | W | V | F | G | E | K | F | D | M | I | F | A | G | S | E | N | L | P | P | A | G | S | A | Y | V | E | L | V |
Template Known Secondary structure |   |
 |  |  |  | S | B | . | . | . | . | . | . | . | . | . | . | . | T | T | B |
| S |
|  |  |  |  |
|
| S | S | . |  |  |  |  |  |
|
| T | T | T |
| S | T |  |  |  |  |  |  |  |  | T | S |
|
|
|
| T | T | B |
|
|
| B | T | T | B |
|
|
| S |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |
|
| . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|  |  |  |  |  |
|
|
|
| . |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
6 | . | . | . | 10 | . | |
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | . | 20 | . | . | . | . | . | |
. | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . |
  |
  |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
65 | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . |
Predicted Secondary structure |   |
. | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |
|
|  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |
Query SS confidence |   |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
A | E | K | L | E | F | N | G | Q | D | L | Q | R | I | S | E | K | E | R | R | N | L | V | G | A | E | V | A | M | I | F | Q | D | P | M | T | S | L | N | P | C | Y | T | V | G | F | Q | I | M | E | A | I | K | V | H | Q | G | G | N | K | S | T |
Query Conservation |   |
. | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |
|   |
|   |   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |
|   |   |   |   |   |
|   |
|   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
. | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   | . | . | . | . |   |   |   |   |   |   |   |   |   | . | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
F | E | E | N | G | E | E | I | T | V | A | R | E | L | K | R | T | G | E | N | T | Y | Y | L | N | G | S | P | V | R | L | K | D | I | R | D | R | F | . |
. |
. |
. |
A | G | T | G | L | G | V | D | F | . |
. |
Y | S | I | V | G | Q | G | Q | I | D | R | I | V | N | A | Y | Q | R | V | N | E | S | F | N | R | F | I |
Template Known Secondary structure |   |
 |  | S | S | S |
|  |  |  |  |  |  |  |  |  | T | T | S |
|  |  |  |  |  | T | T |  |  |  |
|  |  |  |  |  |  |  | T | . | . | . | . | T | T | S | S | T | T | T | T |
| . | . |
| S |  |  |  |  |  |  |  |  |  |  |  | T |
|
|  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  | . | . | . | . |  |  |  |
|
|
|
|
|
| . | . |
|  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
84 | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | |
|
|
|
. | . | . | . | . | . | . | . | 130 | |
|
. | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . |
  |
  |   |
127 | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | |
|
|
|
. | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
| . | . | . | . |
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
R | R | Q | R | A | I | D | L | L | N | Q | V | G | I | P | D | P | A | S | R | L | D | V | Y | P | H | Q | L | S | G | G | M | S | Q | R | V | M | I | A | M | A | I | . |
. |
. |
. |
A | C | R | P | K | L | L | I | A | D | E | P | T | T | A | L | D | V | T | I | Q | A | Q | I | I | E | L | L | L | E | L | Q | Q | K |
Query Conservation |   |
  |   |   |   |   |   |   |   |
|   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |
|   |   |
|
|
|
|   |   |
|
|
|   |
|
|
|
|
| . | . | . | . |   |   |   |
|   |
|
|
|
|
|
|
|
|
|   |
|
|   |   |   |   |   |   |
|   |   |
|
|   |   |
|   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |
|   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |   | . |
Template Sequence |   |
S | L | L | F | F | G | G | E | G | R | L | E | I | S | I | R | K | P | G | R | R | D | Q | K | L | S | L | L | S | G | G | E | K | A | L | V | G | L | A | L | L | F | A | L | M | E | I | K | P | S | P | F | Y | V | L | D | E | V | D | S | P | L | D | D | Y | N | A | E | R | F | K | R | L | L | K | E | N | S | K | . |
Template Known Secondary structure |   |
 |  |  |  | T | S |
|  |  |  |
|
|
|  |  |  |
| T | T | S |
|
|
| B | G | G | G | S |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | T | S |
|
| S |  |  |  |  |  | S |
|
| S | S |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | . |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| . |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
1035 | . | . | . | . | 1040 | . | . | . | . | . | . | . | . | . | 1050 | . | . | . | . | . | . | . | . | . | 1060 | . | . | . | . | . | . | . | . | . | 1070 | . | . | . | . | . | . | . | . | . | 1080 | . | . | . | . | . | . | . | . | . | 1090 | . | . | . | . | . | . | . | . | . | 1100 | . | . | . | . | . | . | . | . | . | 1110 | . | . | . | |
  |
  |   |
203 | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | |
|
. | . | . | . | . | 230 |
Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |
|
|
|  |  | . | . |  |  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
Query Sequence |   |
E | N | M | A | L | V | L | I | T | H | D | L | A | L | V | A | E | A | A | H | K | I | . |
. |
I | V | M | Y | A | G |
Query Conservation |   |
  |   |   |
|
|
|   |
|
|
|
|
|   |   |
|   |   |   |   |
|
|
| . | . |   |
|
|   |   |
|
Alig confidence |   |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
| . | . |
|
|
|
|
|
|
Template Conservation |   |
. |   |   |
|   |
|   |   |   |   |   |   |   |   |   |
|   | . |   |
|   |
|   |   |   |   |   |   |   |
|
Template Sequence |   |
. |
H | T | Q | F | I | V | I | T | H | N | K | I | V | M | E | A | . |
A | D | L | L | H | G | V | T | M | V | N | G |
Template Known Secondary structure |   |
. | T | S |  |  |  |  |  |
|
|
| T | T | G | G | G | G | . |
| S |  |  |  |  |  |  |  | S | S | S |
Template Predicted Secondary structure |   |
. |
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  | . |  |  |  |  |
|
|  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
|
1128 | . | 1130 | . | . | . | . | . | . | . | . | . | 1140 | . | . | . | |
. | . | . | . | . | . | 1150 | . | . | . | . | . |
  |