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Job DescriptionP0AAG0
Confidence100.00%DateThu Jan 5 11:12:50 GMT 2012
Rank53Aligned Residues206
% Identity25%Templatec3bk7A_
PDB info PDB header:hydrolyase/translationChain: A: PDB Molecule:abc transporter atp-binding protein; PDBTitle: structure of the complete abce1/rnaase-l inhibitor protein2 from pyrococcus abysii
Resolution2.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.........60.........70.........80.
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Query Sequence  ALLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISEK
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Template Sequence  TLVEYPRLVKDYGS. . . . . FKLEVEPGEIRKGEVIGIVGPNGIGKTTFVKMLAGVEEP. . . . TEGKVEWDLT. . . . . . . .
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   342.......350..... ....360.........370.........380.........390.... .....400....
 
   82.......90.........100.........110.........120.........130.........140.........150.........160.
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Query Sequence  ERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKSTRRQRAIDLLNQVGIPDPASRLDVYPHQLSGGMSQR
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Template Sequence  . . . . . . . . . VAYKPQY. . IKAEYEGTVYELLSKIDSS. . . . . KLNSNFYKTELLKPLGI. . . IDLYDRNVEDLSGGELQR
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   405....410. ........420.........430 .........440....... ..450.........460.....
 
   162.......170.........180.........190.........200.........210.........220........ .230.........
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Query Sequence  VMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMY. . AGQVVETGDAH
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Template Sequence  VAIAATLLRDADIYLLDEPSAYLDVEQRLAVSRAIRHLMEKNEKTALVVEHDVLMIDYVSDRLIVFEGEPGRHGRALPPM
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   466...470.........480.........490.........500.........510.........520.........530.........540.....
 
   240...
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Query Sequence  AIFH
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Template Sequence  GMRE
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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