Return to main results Retrieve Phyre Job Id

Job DescriptionP0AAG0
Confidence97.90%DateThu Jan 5 11:12:50 GMT 2012
Rank98Aligned Residues122
% Identity24%Templatec2o8dB_
PDB info PDB header:dna binding protein/dnaChain: B: PDB Molecule:dna mismatch repair protein msh6; PDBTitle: human mutsalpha (msh2/msh6) bound to adp and a g du mispair
Resolution3.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   24..... 30.........40.........50.... .....60.........70.........80.........
Predicted Secondary structure 

......









........


















Query SS confidence 





. . . . . .
























. . . . . . . .


































Query Sequence  DRISYS. . . . . . VKQGEVVGIVGESGSGKSVSSLAIM. . . . . . . . GLIDYPGRVMAEKLEFNGQDLQRISEKERRNLVGA
Query Conservation    


 ......
  


  


 







   
 ........

         
 
   
  
              
Alig confidence 





......
























........





...















..........
Template Conservation 


 
              











 






 





  


...  
 
 
 
 





..........
Template Sequence  NDILIGCEEEEQENKAYCVLVTGPNMGGKSTLMRQAGLLAVMAQMGCYVPA. . . EVCRLTPIDRVFTRLG. . . . . . . . . .
Template Known Secondary structure 



STT




B

TTSSTTT

BSS...S


SB

..........
Template Predicted Secondary structure 























...









..........
Template SS confidence 















































































   1111........1120.........1130.........1140.........1150.........1160. ........1170.......
 
   90.........100.........110.........120.........130.........140.........150.........160........
Predicted Secondary structure 


































.
Query SS confidence 














































































.
Query Sequence  EVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKSTRRQRAIDLLNQVGIPDPASRLDVYPHQLSGGMSQRVMIAMAI.
Query Conservation   
  
 
     
 
  

                          
    
          
  



  


 




.
Alig confidence  .................................................................













.
Template Conservation  .................................................................


 


 
   

 
Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . STFFVELSETASILM
Template Known Secondary structure  .................................................................
Template Predicted Secondary structure  .................................................................
Template SS confidence 















































































   1188.1190.........1200..
 
   169170.........180.........190.. .......200.........210.........220...
Predicted Secondary structure  .











.







Query SS confidence  .























.






























Query Sequence  . ACRPKLLIADEPTTALDVTIQAQI. IELLLELQQKENMALVLITHDLALVAEAAHK
Query Conservation  .   
 








 

      
.  

  
      


 




  
    

Alig confidence  .























.






























Template Conservation   

  













 

 


 



 
        




  

       
Template Sequence  HATAHSLVLVDELGRGTATFDGTAIANAVVKELAETIKCRTLFSTHYHSLVEDYSQN
Template Known Secondary structure 

TT

S
TTS
TS




TSS
Template Predicted Secondary structure 



















Template SS confidence 
























































   1203......1210.........1220.........1230.........1240.........1250.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions