Job Description P0AAG0 Confidence 100.00% Date Thu Jan 5 11:12:50 GMT 2012 Rank 51 Aligned Residues 214 % Identity 23% Template c2ghiD_ PDB info PDB header:transport protein Chain: D: PDB Molecule:transport protein; PDBTitle: crystal structure of plasmodium yoelii multidrug resistance2 protein 2 Resolution 2.20 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	N	V	D	K	L	S	V	H	F	G	D	E	S	A	P	F	R	A	V	D	R	I	S	Y	S	V	K	Q	G	E	V	V	G	I	V	G	E	S	G	S	G	K	S	V	S	S	L	A	I	M	G	L	I	D	Y	P	G	R	V	M	A	E	K	L	E	F	N	G	Q	D	L	Q	R	I	S	E	K	E	R
Query Conservation
Alig confidence													.	.	.	.	.	.																																								.	.	.	.	.
Template Conservation													.	.	.	.	.	.																																								.	.	.	.	.
Template Sequence		I	E	F	S	D	V	N	F	S	Y	H	.	.	.	.	.	.	R	T	L	K	S	I	N	F	F	I	P	S	G	T	T	C	A	L	V	G	H	T	G	S	G	K	S	T	I	A	K	L	L	Y	R	F	Y	D	A	.	.	.	.	.	E	G	D	I	K	I	G	G	K	N	V	N	K	Y	N	R	N	S	I
Template Known Secondary structure													.	.	.	.	.	.		S										T	T								S	T	T	S	S									T	T	S	S			.	.	.	.	.							T	T			G	G	G	S
Template Predicted Secondary structure													.	.	.	.	.	.																																								.	.	.	.	.
Template SS confidence
		18	.	20	.	.	.	.	.	.	.	.							.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.						.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.			150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure																																																																				.	.
Query SS confidence																																																																				.	.
Query Sequence		R	N	L	V	G	A	E	V	A	M	I	F	Q	D	P	M	T	S	L	N	P	C	Y	T	V	G	F	Q	I	M	E	A	I	K	V	H	Q	G	G	N	K	S	T	R	R	Q	R	A	I	D	L	L	N	Q	V	G	I	P	D	P	A	S	R	L	D	V	.	.	Y	P	H	Q	L	S	G	G	M	S	Q	R
Query Conservation																																																																				.	.
Alig confidence			.	.	.	.													.	.	.													.	.	.	.	.	.	.																												.	.
Template Conservation			.	.	.	.													.	.	.													.	.	.	.	.	.	.
Template Sequence		R	.	.	.	.	S	I	I	G	I	V	P	Q	D	T	I	L	.	.	.	F	N	E	T	I	K	Y	N	I	L	Y	G	.	.	.	.	.	.	.	K	L	D	A	T	D	E	E	V	I	K	A	T	K	S	A	Q	L	Y	D	F	I	E	A	L	P	K	K	W	D	T	I	V	L	S	G	G	E	R	Q	R
Template Known Secondary structure			.	.	.	.	T	T						S	S				.	.	.		S	S	B							T	T	.	.	.	.	.	.	.	S	T	T													T	T								S	T	T	G	G	G		B
Template Predicted Secondary structure			.	.	.	.													.	.	.													.	.	.	.	.	.	.
Template SS confidence
		92					.	.	.	.	.	.	.	100	.	.	.	.				.	.	.	.	.	110	.	.	.	.	.	.								.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	M	I	A	M	A	I	A	C	R	P	K	L	L	I	A	D	E	P	T	T	A	L	D	V	T	I	Q	A	Q	I	I	E	L	L	L	E	L	Q	Q	K	E	N	M	A	L	V	L	I	T	H	D	L	A	L	V	A	E	A	A	H	K	I	I	V	M	Y	A	G	Q	V	V	E	T	G	D	A	H	A	I
Query Conservation
Alig confidence																									.	.	.	.	.	.	.	.	.	.									.															.
Template Conservation																									.	.	.	.	.	.	.	.	.	.									.															.
Template Sequence		I	A	I	A	R	C	L	L	K	D	P	K	I	V	I	F	D	D	S	K	T	E	Y	.	.	.	.	.	.	.	.	.	.	L	F	Q	K	A	V	E	D	.	N	R	T	L	I	I	I	A	H	R	L	S	T	I	.	S	S	A	E	S	I	I	L	L	N	K	G	K	I	V	E	K	G	T	H	K	D	L
Template Known Secondary structure										T			S												.	.	.	.	.	.	.	.	.	.									.									S	S	G	G	G	S	.	T	T		S							T	T
Template Predicted Secondary structure																									.	.	.	.	.	.	.	.	.	.									.															.
Template SS confidence
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.											.	.	.	190	.	.	.	.		.	.	.	.	.	200	.	.	.	.	.	.	.	.		.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	H	A	P	R	H	P	Y	T	Q	A	L	L	R	A
Query Conservation
Alig confidence				.	.
Template Conservation				.	.
Template Sequence		L	K	.	.	L	N	G	E	Y	A	E	M	W	N	M
Template Known Secondary structure				.	.		T	S								T
Template Predicted Secondary structure				.	.
Template SS confidence
		241	.			.	.	.	.	.	.	.	250	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions