Return to main results Retrieve Phyre Job Id

Job DescriptionP0AAG0
Confidence98.16%DateThu Jan 5 11:12:50 GMT 2012
Rank90Aligned Residues162
% Identity12%Templatec1wxqA_
PDB info PDB header:structural genomics, unknown functionChain: A: PDB Molecule:gtp-binding protein; PDBTitle: crystal structure of gtp binding protein from pyrococcus horikoshii2 ot3
Resolution2.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   36...40.........50.........60.........70.........80.........90......
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Query Sequence  VGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISEKERRNLVGAEVAMIFQ. . . . . . . . . . . . . . . . . . .
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Template Sequence  IGVVGKPNVGKSTFFSAATLANVG. . . . VTYAITDHPCKELGCSPNPQNYEYRNGLALIPVKXVDVAFLDDLRXASALIH
Template Known Secondary structure 
TTSS


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S
SSS

S


SSS
TT




SSTT
S
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   3......10.........20...... ...30.........40.........50.........60.........70........
 
   97..100.........110.........120.........130.........140.........150.........160....
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Query Sequence  . . . . . . . . . . . . DPMTSLNPCYTVGFQIMEAIKVHQGGNKSTRRQRAIDLLNQVGIPDPASRLDVYPHQLSGGMSQRVMI
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Template Sequence  VVDATGKTDPEGQPTDYHDPVEDIEFLEREIDYWI. . . . YGILSKGWDKFAKRIKL. . QKIKLESAIAEHLSGIGVNEND
Template Known Secondary structure  TT

B
TTS
B
S


....TTTSTTTS..S


TGGGT

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   108.110.........120.........130.........140.. .......150......... 160.........170.........180.
 
   165....170.........180.........190.........200.........210...
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Query Sequence  AMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHD
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Template Sequence  VWEAXHKLNLPEDPTKWS. . . . . . QDDLLAFASEIRRVNKPXVIAANKA
Template Known Secondary structure  TT

S
GGG

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G
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   182.......190......... 200.........210.........220....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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