Job Description Q6BF17 Confidence 78.44% Date Thu Jan 5 12:37:31 GMT 2012 Rank 301 Aligned Residues 123 % Identity 18% Template d8ruca1 SCOP info TIM beta/alpha-barrel RuBisCo, C-terminal domain RuBisCo, large subunit, C-terminal domain Resolution 1.60

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		167	.	.	170	.	.	.	.	.					.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.													.	.	220	.	.	.	.	.	.	.	.
Predicted Secondary structure											.	.	.	.																																											.	.	.	.	.	.	.	.	.	.	.	.												.	.
Query SS confidence											.	.	.	.																																											.	.	.	.	.	.	.	.	.	.	.	.												.	.
Query Sequence		V	A	Q	I	R	E	A	F	G	.	.	.	.	N	Q	I	E	F	G	L	D	F	H	G	R	V	S	A	P	M	A	K	V	L	I	K	E	L	E	P	Y	R	P	L	F	I	E	E	P	V	L	A	E	Q	A	.	.	.	.	.	.	.	.	.	.	.	.	E	Y	Y	P	K	L	A	A	Q	T	H	.	.
Query Conservation											.	.	.	.																																											.	.	.	.	.	.	.	.	.	.	.	.												.	.
Alig confidence											.	.	.	.																																											.	.	.	.	.	.	.	.	.	.	.	.												.	.
Template Conservation
Template Sequence		I	Q	V	E	R	D	K	L	N	K	Y	G	R	P	L	L	G	C	T	I	K	P	K	L	G	L	S	A	K	N	Y	G	R	A	V	Y	E	C	L	R	G	G	L	D	F	T	D	D	E	N	V	N	S	Q	P	F	M	R	W	R	D	R	F	L	F	C	A	E	A	L	Y	K	A	Q	A	E	T	G	E	I
Template Known Secondary structure										T			S	S								S	S	S	S																	T	T		S	B				T	T		S	S	B	T	T	B																					S	S
Template Predicted Secondary structure
Template SS confidence
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
					229	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290
Predicted Secondary structure		.	.	.
Query SS confidence		.	.	.
Query Sequence		.	.	.	I	P	L	A	A	G	E	R	M	F	S	R	F	D	F	K	R	V	L	E	A	G	G	I	S	I	L	Q	P	D	L	S	H	A	G	G	I	T	E	C	Y	K	I	A	G	M	A	E	A	Y	D	V	T	L	A	P	H	C	P	L	G	P
Query Conservation		.	.	.
Alig confidence		.	.	.																																			.
Template Conservation																																							.
Template Sequence		K	G	H	Y	L	N	A	T	A	G	T	C	E	D	M	M	K	R	A	V	F	A	R	E	L	G	V	P	I	V	M	H	D	Y	L	T	G	.	G	F	T	A	N	T	T	L	S	H	Y	C	R	D	N	G	L	L	L	H	I	H	R	A	M	H	A
Template Known Secondary structure			B								S	S															T		S										.																T								T	T
Template Predicted Secondary structure																																							.
Template SS confidence
		236	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.		.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions