 |
Job Description | Q6BF17 | Confidence | 66.21% | Date | Thu Jan 5 12:37:31 GMT 2012 |
Rank | 328 | Aligned Residues | 98 |
% Identity | 11% | Template | d1km4a_ |
SCOP info | TIM beta/alpha-barrel
| Ribulose-phoshate binding barrel
| Decarboxylase
|
Resolution | 1.50 |
|
 |
  |   |
189 | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | |
|
|
. | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | |
|
|
|
|
240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 |
Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |
|
|
|
|
|  | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|
|
|
|
| . | . | . | . | . |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
S | A | P | M | A | K | V | L | I | K | E | L | E | P | Y | R | P | L | F | I | E | E | P | V | L | A | . |
. |
. |
E | Q | A | E | Y | Y | P | K | L | A | A | Q | T | H | I | P | L | A | A | G | E | R | M | F | S | . |
. |
. |
. |
. |
R | F | D | F | K | R | V | L | E | A | G | G | I | S | I | L | Q | P | D | L | S |
Query Conservation |   |
  |   |   |   |
|   |   |   |   |   |   |
|   |   |   |   |
|   |   |
|
|
|
|   |   |   | . | . | . |   |
|   |   |   |   |   |   |
|   |   |   |   |   |
|
|
|
|   |
|
|   |   |   |   | . | . | . | . | . |   |   |   |   |   |   |   |
|   |   |   |   |   |
|   |
|   |   |
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|   |
|
|   |   |   |   |   |   |   |   |   | . |
|
|   |
|
|
|
|   |   |   |   |   |   |   |
|   |   |   |
|   |   |
|   |   |   |   |   |   |   |
|
|   |
|   |
|   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
| . |
|
|   |
|
|
|   |   |   |
Template Sequence |   |
N | R | D | D | A | L | R | V | T | G | E | V | R | E | Y | . |
I | D | T | V | K | I | G | Y | P | L | V | L | S | E | G | M | D | I | I | A | E | F | R | K | R | F | G | C | R | I | I | A | D | F | A | V | A | D | I | P | E | T | N | E | K | I | C | R | A | T | F | K | A | G | . |
A | D | A | I | I | V | H | G | F |
Template Known Secondary structure |   |
S |  |  |  |  |  |  |  |  |  |  |  | T | T | T | . |
| S |  |  |  |  |  |  |  |  |  |  |  |  |
| T |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |
| S |
|  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | . |
| S |  |  |  |  |  | S | T |
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |
|
|
| . |
|
|  |  |  |  |
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
| . |
|
|  |  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
23 | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | |
. | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | |
. | . | . | . | . | . | . | . | 100 |
  |
  |   |
261 | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 |
Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|
|
|
|  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
H | A | G | G | I | T | E | C | Y | K | I | A | G | M | A | E | A | Y | D | V | T | L | A | P | H | C | P | L | G | P |
Query Conservation |   |
  |   |
|
|
|
|   |   |   |   |   |   |   |   |
|   |   |   |
|
|   |   |   |   |
|   |   |   |   |   |
Alig confidence |   |
. | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
. | . |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |   |
|   |
Template Sequence |   |
. |
. |
P | G | A | D | S | V | R | A | C | L | N | V | A | E | E | M | G | R | E | V | F | L | L | T | E | M | S | H |
Template Known Secondary structure |   |
. | . | T |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
|  |  |  |  |  |
| S |
| S | S |
Template Predicted Secondary structure |   |
. | . |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
|
|
101 | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|