Job Description Q6BF17 Confidence 65.85% Date Thu Jan 5 12:37:31 GMT 2012 Rank 329 Aligned Residues 122 % Identity 21% Template d1bwva1 SCOP info TIM beta/alpha-barrel RuBisCo, C-terminal domain RuBisCo, large subunit, C-terminal domain Resolution 2.40

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		167	.	.	170	.	.	.	.	.					.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.							.	210	.	.	.	.	.	.							.	.	.	220	.	.	.	.	.	.	.	.
Predicted Secondary structure											.	.	.	.																																		.	.	.	.	.	.									.	.	.	.	.	.													.	.
Query SS confidence											.	.	.	.																																		.	.	.	.	.	.									.	.	.	.	.	.													.	.
Query Sequence		V	A	Q	I	R	E	A	F	G	.	.	.	.	N	Q	I	E	F	G	L	D	F	H	G	R	V	S	A	P	M	A	K	V	L	I	K	E	L	E	P	Y	R	P	L	F	I	.	.	.	.	.	.	E	E	P	V	L	A	E	Q	.	.	.	.	.	.	A	E	Y	Y	P	K	L	A	A	Q	T	H	.	.
Query Conservation											.	.	.	.																																		.	.	.	.	.	.									.	.	.	.	.	.													.	.
Alig confidence											.	.	.	.																																		.	.	.	.	.	.									.	.	.	.	.	.													.	.
Template Conservation
Template Sequence		V	I	L	E	R	E	R	L	D	K	F	G	R	P	L	L	G	C	T	T	K	P	K	L	G	L	S	G	K	N	Y	G	R	V	V	Y	E	A	L	K	G	G	L	D	F	V	D	D	E	N	I	N	S	Q	P	F	M	R	W	R	E	R	Y	L	F	T	M	E	A	V	N	K	A	S	A	A	T	G	E	V
Template Known Secondary structure										T			S	S								S	S	S	S																		T		S	B				T	T		S	S	B	T	T	B																					T	S
Template Predicted Secondary structure
Template SS confidence
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
					229	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290
Predicted Secondary structure		.	.	.
Query SS confidence		.	.	.
Query Sequence		.	.	.	I	P	L	A	A	G	E	R	M	F	S	R	F	D	F	K	R	V	L	E	A	G	G	I	S	I	L	Q	P	D	L	S	H	A	G	G	I	T	E	C	Y	K	I	A	G	M	A	E	A	Y	D	V	T	L	A	P	H	C	P	L	G	P
Query Conservation		.	.	.
Alig confidence		.	.	.																																.	.
Template Conservation																																				.	.
Template Sequence		K	G	H	Y	L	N	V	T	A	A	T	M	E	E	M	Y	A	R	A	N	F	A	K	E	L	G	S	V	I	I	M	I	D	L	.	.	V	I	G	Y	T	A	I	Q	T	M	A	K	W	A	R	D	N	D	M	I	L	H	L	H	R	A	G	N	S
Template Known Secondary structure			B								S	S														T	T		S						G	.	.	G	G															T	T								T	T	T
Template Predicted Secondary structure																																				.	.
Template SS confidence
		236	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.			270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions