Phyre 2 alignment of Q6BF17 with c3ugvE

Job Description Q6BF17
Confidence 100.00% Date Thu Jan 5 12:37:31 GMT 2012

Rank 55 Aligned Residues 338

% Identity 25% Template c3ugvE_

PDB info PDB header:lyase Chain: E: PDB Molecule:enolase; PDBTitle: crystal structure of an enolase from alpha pretobacterium bal199 (efi2 target efi-501650) with bound mg

Resolution 2.30 Å

	Insertion relative to template
	Deletion relative to template
	Catalytic residue from the CSA

Detailed help on interpreting your alignment

	1	.	.	.	.	.	.	.	.	10	.	.	.																	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.			.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.
Predicted Secondary structure														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.
Query SS confidence														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.
Query Sequence	M	K	I	T	K	I	T	T	Y	R	L	P	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	W	M	F	L	K	I	E	T	D	E	G	V	V	G	W	G	E	P	V	I	E	G	.	.	R	A	R	T	V	E	A	A	V	H	E	L	G	D	Y	L	I	G	Q	D	P	S	R	I	N	D
Query Conservation														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.
Alig confidence														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.
Template Conservation
Template Sequence	L	T	F	R	K	L	T	A	R	P	V	L	L	K	L	Q	R	P	V	T	A	R	I	A	T	I	P	D	W	P	L	I	L	I	D	I	E	T	E	E	G	V	P	G	R	A	Y	L	E	P	Y	V	P	K	A	M	K	Y	L	V	P	A	L	H	D	M	S	D	M	L	A	G	Q	P	L	A	P	A	E	I
Template Known Secondary structure		B																				S	S																T	T											S		G	G	G																T	T	S	B
Template Predicted Secondary structure
Template SS confidence
	5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.

	63	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.							.	.	.	.	.	.	130	.	.	.	.	.	.
Predicted Secondary structure																																																														.	.	.	.	.	.
Query SS confidence																																																														.	.	.	.	.	.
Query Sequence	L	W	Q	V	M	Y	R	A	G	F	Y	R	G	G	P	I	L	M	S	A	I	A	G	I	D	Q	A	L	W	D	I	K	G	K	V	L	N	A	P	V	W	Q	L	M	G	G	L	V	R	D	K	I	K	A	Y	S	W	V	G	G	D	.	.	.	.	.	.	R	P	A	D	V	I	D	G	I	K	T	L	R
Query Conservation																																																														.	.	.	.	.	.
Alig confidence																																																.														.	.	.	.	.	.
Template Conservation																																																.
Template Sequence	Y	D	K	T	R	K	S	L	H	F	V	G	Y	A	G	L	S	M	I	A	A	S	G	V	D	M	A	V	W	D	A	L	A	R	A	A	N	M	P	L	C	T	L	L	G	G	T	.	P	G	S	V	K	A	Y	N	S	N	G	L	W	L	K	S	P	A	E	V	A	A	E	A	V	E	L	K	A	E	G	Q
Template Known Secondary structure								T	G	G	G		S	S	T																				T	T	T	S	B					T	T			.										S				S	S															T	T
Template Predicted Secondary structure																																																.
Template SS confidence
	85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.		.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.

	137	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence	E	I	G	F	D	T	F	K	L	N	G	C	E	E	L	G	L	I	D	N	S	R	A	V	D	A	A	V	N	T	V	A	Q	I	R	E	A	F	G	N	Q	I	E	F	G	L	D	F	H	G	R	V	S	A	P	M	A	K	V	L	I	K	E	L	E	P	Y	R	P	L	F	I	E	E	P	V	L	A	E	Q
Query Conservation
Alig confidence															.	.	.	.	.	.	.	.
Template Conservation															.	.	.	.	.	.	.	.
Template Sequence	G	T	G	F	K	G	L	K	L	R	M	G	R	D	.	.	.	.	.	.	.	.	D	P	A	V	D	I	E	T	A	E	A	V	W	D	A	V	G	R	D	T	A	L	M	V	D	F	N	Q	G	L	D	M	A	E	A	M	H	R	T	R	Q	I	D	D	L	G	L	E	W	I	E	E	P	V	V	Y	D	N
Template Known Secondary structure	T	T			S									S	.	.	.	.	.	.	.	.	S																	T	T	S							T	T														T	T	T	S			S						S		T	T
Template Predicted Secondary structure															.	.	.	.	.	.	.	.
Template SS confidence
	164	.	.	.	.	.	170	.	.	.	.	.	.	.									.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.

	217	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence	A	E	Y	Y	P	K	L	A	A	Q	T	H	I	P	L	A	A	G	E	R	M	F	S	R	F	D	F	K	R	V	L	E	A	G	G	I	S	I	L	Q	P	D	L	S	H	A	G	G	I	T	E	C	Y	K	I	A	G	M	A	E	A	Y	D	V	T	L	A	P	H	C	P	L	G	P	I	A	L	A	A	C
Query Conservation
Alig confidence																																																																										.	.	.	.	.
Template Conservation																																																																										.	.	.	.	.
Template Sequence	F	D	G	Y	A	Q	L	R	H	D	L	K	T	P	L	M	I	G	E	N	F	Y	G	P	R	E	M	H	Q	A	L	Q	A	G	A	C	D	L	V	M	P	D	F	M	R	I	G	G	V	S	G	W	M	R	A	A	G	V	A	G	A	W	G	I	P	M	S	T	H	L	Y	P	E	.	.	.	.	.	V	G
Template Known Secondary structure												S	S						T	T			S										T	T			S					B					T																T			B			B	S				.	.	.	.	.
Template Predicted Secondary structure																																																																										.	.	.	.	.
Template SS confidence
	236	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.						.	310

	297	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence	L	H	I	D	F	V	S	Y	N	A	V	L	Q	E	Q	S	M	G	I	H	Y	N	K	G	A	E	L	L	D	F	V	K	N	K	E	D	F	S	M	V	G	G	F	F	K	P	L	T	K	P	G	L	G	V	E	I	D	E	A	K	V	I	E	F	S	K
Query Conservation
Alig confidence																	.	.	.	.	.	.	.	.	.	.
Template Conservation																	.	.	.	.	.	.	.	.	.	.
Template Sequence	A	H	V	M	R	V	T	E	T	A	H	W	L	E	W	Q	.	.	.	.	.	.	.	.	.	.	S	W	A	D	P	I	L	Q	E	P	Y	A	L	S	D	G	D	L	I	V	P	D	K	P	G	L	G	L	D	W	D	E	D	V	V	A	A	N	L	V
Template Known Secondary structure					T	T		T	T	B							.	.	.	.	.	.	.	.	.	.		S	S	G	G	G	B	S	S						T	T						S		S	B	T				B									B
Template Predicted Secondary structure																	.	.	.	.	.	.	.	.	.	.
Template SS confidence
	311	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.											.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.

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No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server

Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]

© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys
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