Job Description Q6BF17 Confidence 100.00% Date Thu Jan 5 12:37:31 GMT 2012 Rank 15 Aligned Residues 359 % Identity 22% Template c3t9pB_ PDB info PDB header:isomerase Chain: B: PDB Molecule:mandelate racemase/muconate lactonizing enzyme family PDBTitle: crystal structure of a putative mandelate racemase/muconate2 lactonizing enzyme family protein from roseovarius Resolution 1.97 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	K	I	T	K	I	T	T	Y	R	L	P	P	R	W	M	F	L	K	I	E	T	D	E	G	V	V	G	W	G	E	P	V	I	E	G	R	A	R	T	V	E	A	A	V	H	E	L	G	D	Y	L	I	G	Q	D	P	S	R	I	N	D	L	W	Q	V	M	Y	R	A	G	F	Y	R	G	G	P	I	L	M
Query Conservation
Alig confidence															.
Template Conservation															.
Template Sequence		M	R	I	A	R	L	E	T	F	C	N	E	F	.	V	G	F	V	R	V	T	T	D	S	G	A	Q	G	W	G	Q	V	S	T	Y	N	A	D	I	T	C	T	I	F	H	R	Q	I	A	P	H	A	L	G	T	D	A	L	D	F	A	D	T	L	D	L	I	Y	E	R	E	L	K	Y	P	G	S	Y	L	R
Template Known Secondary structure			B										S	S	.									T	T										S	S	S												T					T	T	S	B	T	T													T	T	T			S
Template Predicted Secondary structure															.
Template SS confidence
		23	.	.	.	.	.	.	30	.	.	.	.	.		.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.				.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
Predicted Secondary structure																																												.	.	.
Query SS confidence																																												.	.	.
Query Sequence		S	A	I	A	G	I	D	Q	A	L	W	D	I	K	G	K	V	L	N	A	P	V	W	Q	L	M	G	G	L	V	R	D	K	I	K	A	Y	S	W	V	G	G	.	.	.	D	R	P	A	D	V	I	D	G	I	K	T	L	R	E	I	G	F	D	T	F	K	L	N	G	C	E	E	L	G	L	I	D	N	S
Query Conservation																																												.	.	.
Alig confidence																															.													.	.	.																											.
Template Conservation																															.																																										.
Template Sequence		R	A	M	T	G	L	D	T	A	L	W	D	M	R	G	K	L	E	G	K	P	V	A	T	L	L	G	G	S	.	P	G	P	V	R	A	Y	A	S	S	M	R	R	D	I	T	P	E	D	E	A	E	R	F	C	R	L	R	D	D	K	G	F	T	A	F	K	W	R	V	G	.	A	E	A	G	R	D	H	D
Template Known Secondary structure																				T		B					T	T			.	S												S	S	S																										S	.		T	T		T	T
Template Predicted Secondary structure																															.																																										.
Template SS confidence
		102	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130		.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.		.	.	.	.	.	.	.	.
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	A	V	D	A	A	V	N	T	V	A	Q	I	R	E	A	F	G	N	Q	I	E	F	G	L	D	F	H	G	R	V	S	A	P	M	A	K	V	L	I	K	E	L	E	P	Y	R	P	L	F	I	E	E	P	V	L	A	E	Q	A	E	Y	Y	P	K	L	A	A	Q	T	H	I	P	L	A	A	G	E	R	M
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	W	P	G	R	T	E	A	V	V	P	T	V	S	R	A	L	G	D	G	I	E	K	L	V	D	G	N	S	C	Y	S	P	A	R	A	I	E	V	G	K	L	L	Q	D	N	G	I	G	H	F	E	E	P	C	P	Y	W	E	Y	D	Q	T	A	A	V	R	A	A	L	L	L	D	V	A	G	G	E	Q	D
Template Known Secondary structure		S	S	T	T															T	T								T	T																	T	T								S		T	T													S	S						T	T
Template Predicted Secondary structure
Template SS confidence
		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.
		238	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	S	R	F	D	F	K	R	V	L	E	A	G	G	I	S	I	L	Q	P	D	L	S	H	A	G	G	I	T	E	C	Y	K	I	A	G	M	A	E	A	Y	D	V	T	L	A	P	H	C	P	L	G	P	I	A	L	A	A	C	L	H	I	D	F	V	S	Y	N	A	V	L	Q	E	Q	S	M	G	I	H	Y
Query Conservation
Alig confidence																																																																															.
Template Conservation																																																																															.
Template Sequence		C	E	Y	S	S	W	Q	L	M	L	D	R	G	A	V	D	I	V	Q	P	D	V	M	Y	M	G	G	M	H	R	T	L	Q	V	C	Q	M	A	A	R	A	G	L	P	V	T	P	H	A	A	N	L	S	L	V	T	M	C	T	M	H	L	L	R	A	I	P	N	A	G	K	Y	L	E	F	S	I	.	E	G
Template Known Secondary structure			S										T	T			S										T	S														T	T			B						S	S	S											T	T		T	T	B		S							.
Template Predicted Secondary structure																																																																															.
Template SS confidence
		260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.		.	.
		318	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	K	G	A	E	L	L	D	F	V	K	N	K	E	D	F	S	M	V	G	G	F	F	K	P	L	T	K	P	G	L	G	V	E	I	D	E	A	K	V	I	E	F	S	K	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	E	Y	Y	P	W	Q	E	G	L	F	L	G	D	P	Y	R	I	E	G	G	Q	A	I	V	T	D	A	P	G	W	G	V	E	I	S	P	T	W	L	D	S	A	T	Y	Q
Template Known Secondary structure		T	T	T		G	G	G	T	T	S	B	S	S		T	T			B	T	T						S		S	B	T	S			B								S
Template Predicted Secondary structure
Template SS confidence
		339	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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