Job Description Q6BF17 Confidence 80.77% Date Thu Jan 5 12:37:31 GMT 2012 Rank 290 Aligned Residues 175 % Identity 13% Template c3si9B_ PDB info PDB header:lyase Chain: B: PDB Molecule:dihydrodipicolinate synthase; PDBTitle: crystal structure of dihydrodipicolinate synthase from bartonella2 henselae Resolution 2.10 Å

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		105	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	M	G	G	L	V	R	D	K	I	K	A	Y	S	W	V	G	G	D	R	P	A	D	V	I	D	G	I	K	T	L	R	E	I	G	F	D	T	F	K	L	N	G	C	E	E	L	G	L	I	D	N	S	R	A	V	D	A	A	V	N	T	V	A	Q	I	R	E	A	F	G	N	Q	I	E	F	G	L	D	F
Query Conservation
Alig confidence																																																					.	.	.
Template Conservation																																																					.	.	.
Template Sequence		M	L	K	G	A	V	T	A	L	I	T	P	F	D	D	N	G	A	I	D	E	K	A	F	C	N	F	V	E	W	Q	I	T	Q	G	I	N	G	V	S	P	V	G	T	T	G	E	S	P	T	L	.	.	.	T	H	E	E	H	K	R	I	I	E	L	C	V	E	Q	V	A	K	R	V	P	V	V	A	G	A
Template Known Secondary structure														B		T	T	S		B															T	T		S					S	S	T	T	T	T	G	G	G		.	.	.																	T	T	S	S		B
Template Predicted Secondary structure																																																					.	.	.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.				.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		185	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.								.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.							.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.
Predicted Secondary structure																								.	.	.	.	.	.	.																														.	.	.	.	.	.
Query SS confidence																								.	.	.	.	.	.	.																														.	.	.	.	.	.
Query Sequence		H	G	R	V	S	A	P	M	A	K	V	L	I	K	E	L	E	P	Y	R	P	L	.	.	.	.	.	.	.	F	I	E	E	P	V	L	A	E	Q	A	E	Y	Y	P	K	L	A	A	Q	T	H	I	P	L	A	A	G	E	.	.	.	.	.	.	R	M	F	S	R	F	D	F	K	R	V	L	E	A	G	G
Query Conservation																								.	.	.	.	.	.	.																														.	.	.	.	.	.
Alig confidence			.																					.	.	.	.	.	.	.																														.	.	.	.	.	.																.
Template Conservation			.																																																																														.
Template Sequence		G	.	S	N	S	T	S	E	A	V	E	L	A	K	H	A	E	K	A	G	A	D	A	V	L	V	V	T	P	Y	Y	N	R	P	N	Q	R	G	L	Y	T	H	F	S	S	I	A	K	A	I	S	I	P	I	I	I	Y	N	I	P	S	R	S	V	I	D	M	A	V	E	T	M	R	D	L	C	R	D	F	.
Template Known Secondary structure			.		S	S														T	T		S									S	S																			S	S												S	S															.
Template Predicted Secondary structure			.																																																																														.
Template SS confidence
		82		.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
		252	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	S	I	L	Q	P	D	L	S	H	A	G	G	I	T	E	C	Y	K	I	A	G	M	A	E	A	Y	D	V	T	L	A	P	H	C
Query Conservation
Alig confidence												.																.
Template Conservation												.																.
Template Sequence		K	N	I	I	G	V	K	D	A	T	.	G	K	I	E	R	A	S	E	Q	R	E	K	C	G	K	.	D	F	V	Q	L	S	G	D
Template Known Secondary structure		T	T								S	.			T												T	.	T	S					S
Template Predicted Secondary structure												.																.
Template SS confidence
		160	.	.	.	.	.	.	.	.	.		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.		.	.	.	.	.	190	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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