Job Description Q6BF17 Confidence 100.00% Date Thu Jan 5 12:37:31 GMT 2012 Rank 13 Aligned Residues 357 % Identity 30% Template c3rcyC_ PDB info PDB header:isomerase Chain: C: PDB Molecule:mandelate racemase/muconate lactonizing enzyme-like PDBTitle: crystal structure of mandelate racemase/muconate lactonizing enzyme-2 like protein from roseovarius sp. tm1035 Resolution 1.99 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		1	.	.	.	.	.	.	.	.	10	.	.	.									.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.		.	.	.	.	40	.	.	.	.	.	.	.		.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Predicted Secondary structure															.	.	.	.	.	.	.	.																							.													.
Query SS confidence															.	.	.	.	.	.	.	.																							.													.
Query Sequence		M	K	I	T	K	I	T	T	Y	R	L	P	P	.	.	.	.	.	.	.	.	R	W	M	F	L	K	I	E	T	D	E	G	V	V	G	W	G	E	P	V	I	E	.	G	R	A	R	T	V	E	A	A	V	H	E	.	L	G	D	Y	L	I	G	Q	D	P	S	R	I	N	D	L	W	Q	V	M	Y	R	A
Query Conservation															.	.	.	.	.	.	.	.																							.													.
Alig confidence															.	.	.	.	.	.	.	.																							.													.
Template Conservation
Template Sequence		V	K	L	R	D	L	D	I	I	V	T	A	P	P	A	P	G	W	G	G	R	Y	W	I	L	V	K	L	T	T	D	D	G	I	T	G	W	G	E	C	Y	A	A	S	V	G	P	E	A	M	R	A	V	I	E	D	V	F	A	R	H	M	E	G	E	N	P	E	N	I	E	L	M	F	R	R	V	Y	S	S
Template Known Secondary structure																T	T		T	T		S										T	T												S	S																	T	T	T	S		T	T												T
Template Predicted Secondary structure
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		71	.	.	.	.		.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.											.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.
Predicted Secondary structure							.																																															.	.	.	.	.	.	.	.	.	.
Query SS confidence							.																																															.	.	.	.	.	.	.	.	.	.
Query Sequence		G	F	Y	R	G	.	G	P	I	L	M	S	A	I	A	G	I	D	Q	A	L	W	D	I	K	G	K	V	L	N	A	P	V	W	Q	L	M	G	G	L	V	R	D	K	I	K	A	Y	S	W	V	G	.	.	.	.	.	.	.	.	.	.	G	D	R	P	A	D	V	I	D	G	I	K	T	L	R	E	I	G
Query Conservation							.																																															.	.	.	.	.	.	.	.	.	.
Alig confidence							.																																															.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	F	T	Q	R	P	D	L	T	A	I	G	A	F	S	G	L	E	I	A	C	W	D	I	L	G	K	A	R	G	R	P	V	W	A	L	L	G	G	K	M	N	P	R	I	R	A	Y	T	Y	L	Y	P	L	P	H	H	P	I	T	P	F	W	T	S	A	D	M	A	A	E	S	A	A	D	C	V	A	R	G
Template Known Secondary structure		T	T			S																									T	S	B	G	G	G	G	T	T			S		S	S											T	T	S						T	T															T	T
Template Predicted Secondary structure
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
		140	.	.	.	.	.	.	.	.	.					150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.
Predicted Secondary structure												.	.	.	.
Query SS confidence												.	.	.	.
Query Sequence		F	D	T	F	K	L	N	G	C	E	.	.	.	.	E	L	G	L	I	D	N	S	R	A	V	D	A	A	V	N	T	V	A	Q	I	R	E	A	F	G	N	Q	I	E	F	G	L	D	F	H	G	R	V	S	A	P	M	A	K	V	L	I	K	E	L	E	P	Y	R	P	L	F	I	E	E	P	V	L	A	E
Query Conservation												.	.	.	.
Alig confidence												.	.	.	.
Template Conservation
Template Sequence		Y	T	A	V	K	F	D	P	A	G	P	Y	T	L	R	G	G	H	M	P	A	M	T	D	I	S	L	S	V	E	F	C	R	K	I	R	A	A	V	G	D	K	A	D	L	L	F	G	T	H	G	Q	F	T	T	A	G	A	I	R	L	G	Q	A	I	E	P	Y	S	P	L	W	Y	E	E	P	V	P	P	D
Template Known Secondary structure			S							S				B	T	T			B																						T	T	S	S								S		B													G	G	G			S						S		T	T
Template Predicted Secondary structure
Template SS confidence
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
		216	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	A	E	Y	Y	P	K	L	A	A	Q	T	H	I	P	L	A	A	G	E	R	M	F	S	R	F	D	F	K	R	V	L	E	A	G	G	I	S	I	L	Q	P	D	L	S	H	A	G	G	I	T	E	C	Y	K	I	A	G	M	A	E	A	Y	D	V	T	L	A	P	H	C	P	L	G	P	I	A	L	A	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	V	G	A	M	A	Q	V	A	R	A	V	R	I	P	V	A	T	G	E	R	L	T	T	K	A	E	F	A	P	V	L	R	E	G	A	A	A	I	L	Q	P	A	L	G	R	A	G	G	I	W	E	M	K	K	V	A	A	M	A	E	V	Y	N	A	Q	M	A	P	H	L	Y	A	G	P	V	E	W	A	A
Template Known Secondary structure													S	S	S						T	T			S										T	T			S										T														T	T	T								S	S
Template Predicted Secondary structure
Template SS confidence
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320
		296	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	L	H	I	D	F	V	S	Y	N	A	V	L	Q	E	Q	S	M	G	I	H	Y	N	K	G	A	E	L	L	D	F	V	K	N	K	E	D	F	S	M	V	G	G	F	F	K	P	L	T	K	P	G	L	G	V	E	I	D	E	A	K	V	I	E	F	S	K	N	A	P
Query Conservation
Alig confidence																			.	.	.	.	.	.	.	.
Template Conservation																			.	.	.	.	.	.	.	.
Template Sequence		N	V	H	F	A	A	S	I	P	N	I	L	M	C	E	S	I	.	.	.	.	.	.	.	.	E	T	P	F	H	D	A	L	I	K	G	S	I	R	V	E	G	G	Y	I	T	P	P	E	A	P	G	L	G	I	E	V	D	E	A	L	A	R	A	N	P	Y	H	G	T
Template Known Secondary structure								T		T	T	B							.	.	.	.	.	.	.	.									T	T	T	S	S				T	T							S	S	B	T												S	B				S
Template Predicted Secondary structure																			.	.	.	.	.	.	.	.
Template SS confidence
		321	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.									.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions