Job Description Q6BF17 Confidence 100.00% Date Thu Jan 5 12:37:31 GMT 2012 Rank 82 Aligned Residues 344 % Identity 15% Template c3mwcA_ PDB info PDB header:ligase Chain: A: PDB Molecule:mandelate racemase/muconate lactonizing protein; PDBTitle: crystal structure of probable o-succinylbenzoic acid synthetase from2 kosmotoga olearia Resolution 1.80 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.																	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.									.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.
Predicted Secondary structure																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.
Query SS confidence																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.
Query Sequence		M	K	I	T	K	I	T	T	Y	R	L	P	P	R	W	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	M	F	L	K	I	E	T	D	E	G	V	V	G	W	G	E	P	V	I	E	G	R	A	.	.	.	.	.	.	.	.	R	T	V	E	A	A	V	H	E	L	G	D	Y	L	I	G	Q	D
Query Conservation																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.
Alig confidence																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.																.	.	.	.	.	.	.	.
Template Conservation																																								.
Template Sequence		A	R	I	D	G	V	S	L	Y	E	I	V	I	P	M	K	I	P	F	Q	I	S	S	G	T	C	Y	T	R	R	S	L	V	V	E	I	R	E	.	G	D	L	F	G	Y	G	E	S	A	P	F	E	E	P	F	Y	L	G	E	T	L	E	T	T	K	V	I	L	K	N	H	L	L	P	M	I	L	G	K	E
Template Known Secondary structure																	S	S				B	T	T	B															.	T	T										B	S	S	T	T	S	T	T		B											T						T	T
Template Predicted Secondary structure																																								.
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.		.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
		57	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.
Predicted Secondary structure																																																																						.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																						.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		P	S	R	I	N	D	L	W	Q	V	M	Y	R	A	G	F	Y	R	G	G	P	I	L	M	S	A	I	A	G	I	D	Q	A	L	W	D	I	K	G	K	V	L	N	A	P	V	W	Q	L	M	G	G	L	V	R	D	K	I	K	A	Y	S	W	V	G	G	D	R	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																																						.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																				.	.	.	.	.																																														.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																				.	.	.	.	.
Template Sequence		P	L	S	I	E	E	F	N	H	L	I	K	N	G	I	R	G	N	.	.	.	.	.	H	F	A	R	C	G	V	E	N	A	Y	W	D	L	I	A	K	K	N	K	I	S	L	K	A	M	I	E	K	K	M	K	N	L	G	V	K	Q	E	Y	L	A	S	N	N	Y	I	E	S	G	A	A	L	G	I	P	E
Template Known Secondary structure			S	S											S			S		.	.	.	.	.																			T	T		B												T	T			G	G	G	G		B		S				B								T
Template Predicted Secondary structure																				.	.	.	.	.
Template SS confidence
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.						.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
					125	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.
Predicted Secondary structure		.	.	.
Query SS confidence		.	.	.
Query Sequence		.	.	.	P	A	D	V	I	D	G	I	K	T	L	R	E	I	G	F	D	T	F	K	L	N	G	C	E	E	L	G	L	I	D	N	S	R	A	V	D	A	A	V	N	T	V	A	Q	I	R	E	A	F	G	N	Q	I	E	F	G	L	D	F	H	G	R	V	S	A	P	M	A	K	V	L	I	K	E	L	E
Query Conservation		.	.	.
Alig confidence		.	.	.																											.	.	.	.	.	.	.	.	.	.	.																														.
Template Conservation																															.	.	.	.	.	.	.	.	.	.	.																														.
Template Sequence		D	G	R	I	E	T	L	I	H	Q	V	E	E	S	L	Q	E	G	Y	R	R	I	K	I	K	I	K	P	G	.	.	.	.	.	.	.	.	.	.	.	W	D	V	E	P	L	Q	E	T	R	R	A	V	G	D	H	F	P	L	W	T	D	A	N	S	S	F	E	L	.	D	Q	W	E	T	F	K	A	M	D
Template Known Secondary structure		T																	T		S							B	T	T	.	.	.	.	.	.	.	.	.	.	.	B	S													T	T	S							T	T				G	.	G	G								G
Template Predicted Secondary structure																															.	.	.	.	.	.	.	.	.	.	.																														.
Template SS confidence
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.												.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.		.	.	220	.	.	.	.	.	.	.
		202	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	Y	R	P	L	F	I	E	E	P	V	L	A	E	Q	A	E	Y	Y	P	K	L	A	A	Q	T	H	I	P	L	A	A	G	E	R	M	F	S	R	F	D	F	K	R	V	L	E	A	G	G	I	S	I	L	Q	P	D	L	S	H	A	G	G	I	T	E	C	Y	K	I	A	G	M	A	E	A	Y	D	V	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	A	K	C	L	F	H	E	Q	P	L	H	Y	E	A	L	L	D	L	K	E	L	G	E	R	I	E	T	P	I	C	L	D	E	S	L	I	S	S	R	V	A	E	F	V	A	K	L	G	I	S	N	I	W	N	I	K	I	Q	R	V	G	G	L	L	E	A	I	K	I	Y	K	I	A	T	D	N	G	I	K
Template Known Secondary structure		G	G			S				S		S		T	T												S	S	S					S	T	T			S										T	T			S										T	S														T	T
Template Predicted Secondary structure
Template SS confidence
		228	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.
		282	.	.	.	.	.	.		.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360
Predicted Secondary structure									.
Query SS confidence									.
Query Sequence		L	A	P	H	C	P	L	.	G	P	I	A	L	A	A	C	L	H	I	D	F	V	S	Y	N	A	V	L	Q	E	Q	S	M	G	I	H	Y	N	K	G	A	E	L	L	D	F	V	K	N	K	E	D	F	S	M	V	G	G	F	F	K	P	L	T	K	P	G	L	G	V	E	I	D	E	A	K	V	I	E	F
Query Conservation									.
Alig confidence									.																											.	.	.	.	.	.
Template Conservation																																				.	.	.	.	.	.
Template Sequence		L	W	G	G	T	M	P	E	S	G	L	G	A	R	F	L	I	S	L	A	S	F	R	G	F	V	F	P	A	D	V	A	A	S	.	.	.	.	.	.	E	K	W	Y	G	K	G	N	D	L	V	E	N	T	M	T	D	G	K	I	Y	V	P	D	E	P	G	A	S	F	D	M	T	L	S	H	L	E	A	L
Template Known Secondary structure							S														T	T	B	T	T	B		S		B						.	.	.	.	.	.						T	T	T	S	S	S						T	T							S	B	T	T	T	T	T
Template Predicted Secondary structure																																				.	.	.	.	.	.
Template SS confidence
		308	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.							.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.
		361	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	K	N	A	P	D	W	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	K	K	I	W	E	S	Q
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		382	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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