Job Description Q6BF17 Confidence 38.77% Date Thu Jan 5 12:37:31 GMT 2012 Rank 406 Aligned Residues 185 % Identity 13% Template c3l2iB_ PDB info PDB header:lyase Chain: B: PDB Molecule:3-dehydroquinate dehydratase; PDBTitle: 1.85 angstrom crystal structure of the 3-dehydroquinate dehydratase2 (arod) from salmonella typhimurium lt2. Resolution 1.85 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		113	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																														.	.	.	.
Query SS confidence																																																																														.	.	.	.
Query Sequence		K	I	K	A	Y	S	W	V	G	G	D	R	P	A	D	V	I	D	G	I	K	T	L	R	E	I	G	F	D	T	F	K	L	N	G	C	E	E	L	G	L	I	D	N	S	R	A	V	D	A	A	V	N	T	V	A	Q	I	R	E	A	F	G	N	Q	I	E	F	G	L	D	F	H	G	R	V	.	.	.	.
Query Conservation																																																																														.	.	.	.
Alig confidence																																					.	.	.	.																									.													.	.	.	.
Template Conservation																																					.	.	.	.																									.
Template Sequence		A	P	K	I	I	V	S	L	M	G	K	T	I	T	D	V	K	S	E	A	L	A	Y	R	E	A	D	F	D	I	L	E	W	R	V	.	.	.	.	D	H	F	A	N	V	T	T	A	E	S	V	L	E	A	A	G	A	I	R	E	I	I	T	.	D	K	P	L	L	F	T	F	R	S	A	K	E	G	G	E
Template Known Secondary structure		S										S	S												T	T	S			S						G	.	.	.	.	G	G		T	T	T	T																		.	S	S									G	G	G	T		S
Template Predicted Secondary structure																																					.	.	.	.																									.
Template SS confidence
		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.					50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.		.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
					189	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.				.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.					.	.	.	240	.	.	.	.	.	.				.	.	.	250	.	.	.	.	.
Predicted Secondary structure		.	.	.																	.	.	.																																	.	.	.	.											.	.	.
Query SS confidence		.	.	.																	.	.	.																																	.	.	.	.											.	.	.
Query Sequence		.	.	.	S	A	P	M	A	K	V	L	I	K	E	L	E	P	Y	R	.	.	.	P	L	F	I	E	E	P	V	L	A	E	Q	A	E	Y	Y	P	K	L	A	A	Q	T	H	I	P	L	A	A	G	E	R	.	.	.	.	M	F	S	R	F	D	F	K	R	V	.	.	.	L	E	A	G	G	I	S	I	L
Query Conservation		.	.	.																	.	.	.																																	.	.	.	.											.	.	.
Alig confidence		.	.	.																	.	.	.																																	.	.	.	.											.	.	.
Template Conservation
Template Sequence		Q	A	L	T	T	G	Q	Y	I	D	L	N	R	A	A	V	D	S	G	L	V	D	M	I	D	L	E	L	F	T	G	D	D	E	V	K	A	T	V	G	Y	A	H	Q	H	N	V	A	V	I	M	S	N	H	D	F	H	K	T	P	A	A	E	E	I	V	Q	R	L	R	K	M	Q	E	L	G	A	D	I	P
Template Known Secondary structure		S																		S			S						G	G	G															T	T										S	S																		T	T		S
Template Predicted Secondary structure
Template SS confidence
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.
		256	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.						.	280	.	.	.	.	.	.	.	.			.	290	.	.	.	.	.	.	.	.	.	300	.	.	.
Predicted Secondary structure																									.	.	.	.	.											.	.
Query SS confidence																									.	.	.	.	.											.	.
Query Sequence		Q	P	D	L	S	H	A	G	G	I	T	E	C	Y	K	I	A	G	M	A	E	A	Y	.	.	.	.	.	D	V	T	L	A	P	H	C	P	L	.	.	G	P	I	A	L	A	A	C	L	H	I	D	F	V	S
Query Conservation																									.	.	.	.	.											.	.
Alig confidence									.																.	.	.	.	.											.	.
Template Conservation									.
Template Sequence		K	I	A	V	M	P	Q	.	T	K	A	D	V	L	T	L	L	T	A	T	V	E	M	Q	E	R	Y	A	D	R	P	I	I	T	M	S	M	S	K	T	G	V	I	S	R	L	A	G	E	V	F	G	S	A	A
Template Known Secondary structure								S	.	S																		T		S	S								T	G	G	G	T
Template Predicted Secondary structure									.
Template SS confidence
		170	.	.	.	.	.	.		.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions