Job Description Q6BF17 Confidence 100.00% Date Thu Jan 5 12:37:31 GMT 2012 Rank 86 Aligned Residues 314 % Identity 25% Template c3ijlA_ PDB info PDB header:isomerase Chain: A: PDB Molecule:muconate cycloisomerase; PDBTitle: structure of dipeptide epimerase from bacteroides thetaiotaomicron2 complexed with l-pro-d-glu; nonproductive substrate binding. Resolution 1.50 Å

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		5	.	.	.	.	10	.	.	.	.	.																	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.		.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.			.	.	.	.	60	.	.	.	.	.
Predicted Secondary structure													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.																				.	.
Query SS confidence													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.																				.	.
Query Sequence		K	I	T	T	Y	R	L	P	P	R	W	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	M	F	L	K	I	E	T	D	E	G	V	V	G	W	G	E	P	V	I	E	G	.	R	A	R	T	V	E	A	A	V	H	E	L	G	D	Y	L	I	G	Q	.	.	D	P	S	R	I	N	D	L	W	Q
Query Conservation													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.																				.	.
Alig confidence													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.													.																				.	.
Template Conservation																																					.
Template Sequence		K	M	T	F	F	P	Y	E	L	K	L	R	H	V	F	T	V	A	T	Y	S	R	T	T	T	P	D	V	Q	V	E	I	E	Y	E	.	G	V	T	G	Y	G	E	A	S	M	P	P	Y	L	G	E	T	V	E	S	V	M	N	F	L	K	K	V	N	L	E	Q	F	S	D	P	F	Q	L	E	D	I	L	S
Template Known Secondary structure																			T	T																T	.	T											G	G	G	S											T	T				T	T				T	T
Template Predicted Secondary structure																																					.
Template SS confidence
		47	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.		.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.
		66	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	M	Y	R	A	G	F	Y	R	G	G	P	I	L	M	S	A	I	A	G	I	D	Q	A	L	W	D	I	K	G	K	V	L	N	A	P	V	W	Q	L	M	G	G	L	V	R	D	K	I	K	A	Y	S	W	V	G	G	D	R	P	A	D	V	I	D	G	I	K	T	L	R	E	I	G	F	D	T	F	K	L
Query Conservation
Alig confidence											.	.	.	.	.																																																									.
Template Conservation											.	.	.	.	.																																																									.
Template Sequence		Y	V	D	S	L	S	P	K	D	.	.	.	.	.	T	A	A	K	A	A	V	D	I	A	L	H	D	L	V	G	K	L	L	G	A	P	W	Y	K	I	W	G	L	N	K	E	K	T	P	S	T	T	F	T	I	G	I	D	T	P	D	V	V	R	A	K	T	K	E	C	.	A	G	L	F	N	I	L	K	V
Template Known Secondary structure						T		S			.	.	.	.	.																				T	S	B					T	T			G	G	G			B	B			B																	.		T	T		S	S
Template Predicted Secondary structure											.	.	.	.	.																																																									.
Template SS confidence
		126	.	.	.	130	.	.	.	.						.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190		.	.	.	.	.	.	.	.	.
		146	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.		190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.
Predicted Secondary structure																																														.
Query SS confidence																																														.
Query Sequence		N	G	C	E	E	L	G	L	I	D	N	S	R	A	V	D	A	A	V	N	T	V	A	Q	I	R	E	A	F	G	N	Q	I	E	F	G	L	D	F	H	G	R	V	S	.	A	P	M	A	K	V	L	I	K	E	L	E	P	Y	R	P	L	F	I	E	E	P	V	L	A	E	Q	A	E	Y	Y	P	K	L	A
Query Conservation																																														.
Alig confidence							.	.	.	.	.	.	.	.	.	.	.													.	.															.
Template Conservation							.	.	.	.	.	.	.	.	.	.	.													.	.
Template Sequence		K	L	G	R	D	.	.	.	.	.	.	.	.	.	.	.	N	D	K	E	M	I	E	T	I	R	S	V	.	.	T	D	L	P	I	A	V	D	A	N	Q	G	W	K	D	R	Q	Y	A	L	D	M	I	H	W	L	K	E	K	G	I	V	M	I	E	Q	P	M	P	K	E	Q	L	D	D	I	A	W	V	T
Template Known Secondary structure				S	S	S	.	.	.	.	.	.	.	.	.	.	.											T	T	.	.										T	T																		T	T								S		T	T
Template Predicted Secondary structure							.	.	.	.	.	.	.	.	.	.	.													.	.
Template SS confidence
		200	.	.	.	.												.	.	.	.	.	210	.	.	.	.	.	.			.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.
		225	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.		.	290	.	.	.	.	.	.	.	.	.	300	.	.	.
Predicted Secondary structure																																																																		.
Query SS confidence																																																																		.
Query Sequence		A	Q	T	H	I	P	L	A	A	G	E	R	M	F	S	R	F	D	F	K	R	V	L	E	A	G	G	I	S	I	L	Q	P	D	L	S	H	A	G	G	I	T	E	C	Y	K	I	A	G	M	A	E	A	Y	D	V	T	L	A	P	H	C	P	L	.	G	P	I	A	L	A	A	C	L	H	I	D	F	V	S
Query Conservation																																																																		.
Alig confidence																								.	.																																									.
Template Conservation																								.	.
Template Sequence		Q	Q	S	P	L	P	V	F	A	D	E	S	L	Q	R	L	G	D	V	A	A	L	.	.	K	G	A	F	T	G	I	N	I	K	L	M	K	C	T	G	M	R	E	A	W	K	M	V	T	L	A	H	A	L	G	M	R	V	M	V	G	C	M	T	E	T	S	C	A	I	S	A	A	S	Q	F	S	P	A	V
Template Known Secondary structure			T		S	S					S	T	T			S	G	G	G	T	G	G	G	.	.	B	T	T	B	S										T	S														T	T									S											T	T	G	G	G
Template Predicted Secondary structure																								.	.
Template SS confidence
		267	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.			.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.
		304	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	N	A	V	L	Q	E	Q	S	M	G	I	H	Y	N	K	G	A	E	L	L	D	F	V	K	N	K	E	D	F	S	M	V	G	G	F	F	K	P	L	T	K	P	G	L	G	V	E
Query Conservation
Alig confidence										.	.	.	.	.	.	.	.	.	.	.
Template Conservation										.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	F	A	D	L	D	G	N	.	.	.	.	.	.	.	.	.	.	.	L	L	I	S	N	D	R	F	K	G	V	E	V	V	N	G	K	I	T	L	N	D	L	P	G	I	G	V	M
Template Known Secondary structure		S						G	G	.	.	.	.	.	.	.	.	.	.	.	G	G	B	S					B						T	T						S		S	B	T			B
Template Predicted Secondary structure										.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		345	.	.	.	.	350	.	.												.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions