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Job DescriptionQ6BF17
Confidence100.00%DateThu Jan 5 12:37:31 GMT 2012
Rank12Aligned Residues357
% Identity28%Templatec3h12B_
PDB info PDB header:isomeraseChain: B: PDB Molecule:mandelate racemase; PDBTitle: crystal structure of putative mandelate racemase from bordetella2 bronchiseptica rb50
Resolution1.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  MKITKITTYRLPPRW. . . . . . . . . . . . . . . . . . MFLKIETDEGVVGWGEPVIEGRARTVEAAVHE. LGDYLIGQDPSRIN
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Template Sequence  LKITEVKAHALSTPIPERMRVESGAGLKLNRQMILVEVRTDEGVTGVGSPSGPYDLAVLKRAIEDVIGPQLIGEDPANIN
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GGG

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Query Sequence  DLWQVMYRAGFY. . . RGGPILMSAIAGIDQALWDIKGKVLNAPVWQLMGGLVRDK. IKAYSWVGG. . DRPADVIDGIKTL
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Template Sequence  YLWHKVFHGEVSRNLGHRSVGIAAMSGVDIALWDLKGRAMNQPIYQLLGGKFHTRGVRAYASSIYWDLTPDQAADELAGW
Template Known Secondary structure  T
SSSTSBTTS
S
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SS

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   83......90.........100.........110.........120.........130.........140.........150.........160..
 
   136...140.........150.........160.........170.........180.........190.........200.........210.....
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Query Sequence  REIGFDTFKLNGCEELGLIDNSRAVDAAVNTVAQIREAFGNQIEFGLDFHGRVSAPMAKVLIKELEPYRPLFIEEPVLAE
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Template Sequence  VEQGFTAAKLKVGR. . . . . . . . . APRKDAANLRAMRQRVGADVEILVDANQSLGRHDALAMLRILDEAGCYWFEEPLSID
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S
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   163......170...... ...180.........190.........200.........210.........220.........230...
 
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Query Sequence  QAEYYPKLA. AQTHIPLAAGERMFSRFDFKRVLEAGGISILQPDLSHAGGITECYKIAGMAEAYDVTLAPHCPLGPIALA
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Template Sequence  DIEGHRILRAQGTPVRIATGENLYTRNAFNDYIRNDAIDVLQADASRAGGITEALAISASAASAHLAWNPHTFNDIITVA
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   234.....240.........250.........260.........270.........280.........290.........300.........310...
 
   295....300.........310.........320.........330.........340.........350.........360.........370..
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Query Sequence  ACLHIDFVSYNAVLQEQSMGIHYNKGAELLDFVKNKEDFSMVGGFFKPLTKPGLGVEIDEAKVIEFSKNAPDWRNPLW
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Template Sequence  ANLHLVAASPHPAMFEWDIT. . . . . . HNDLMTRLASYDLKLENGLVQPPQGPGLGFEIDWDFVAAHAWKGEPAIGAGH
Template Known Secondary structure  SSS



S......S
GGGTTSBS




BTT



SSBTSS
B
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   314.....320.........330... ......340.........350.........360.........370.........380.....
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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