Job Description Q6BF17 Confidence 100.00% Date Thu Jan 5 12:37:31 GMT 2012 Rank 30 Aligned Residues 345 % Identity 22% Template c3fv9D_ PDB info PDB header:hydrolase Chain: D: PDB Molecule:mandelate racemase/muconate lactonizing enzyme; PDBTitle: crystal structure of putative mandelate racemase/muconatelactonizing2 enzyme from roseovarius nubinhibens ism complexed with magnesium Resolution 1.90 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.																			.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.							.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.
Predicted Secondary structure																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.	.	.
Query SS confidence																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.	.	.
Query Sequence		M	K	I	T	K	I	T	T	Y	R	L	P	P	R	W	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	M	F	L	K	I	E	T	D	E	G	V	V	G	W	G	E	P	V	I	E	G	R	.	.	.	.	.	.	A	R	T	V	E	A	A	V	H	E	L	G	D	Y	L	I	G	Q	D
Query Conservation																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.	.	.
Alig confidence																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.	.	.
Template Conservation
Template Sequence		L	K	I	T	R	I	D	I	H	R	T	D	L	P	V	R	G	G	V	Y	R	L	S	G	G	R	E	Y	H	S	Y	D	A	T	I	V	S	I	E	T	D	T	G	L	T	G	W	G	E	S	T	P	F	G	S	T	Y	I	A	A	H	A	G	G	T	R	A	A	L	E	L	L	A	P	A	I	L	G	M	D
Template Known Secondary structure																B	S	S	S					G	G	G				S												T	T	S										S	T	T	S	S	S	S																		T	T	S
Template Predicted Secondary structure
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		57	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	S	R	I	N	D	L	W	Q	V	M	Y	R	A	G	F	Y	R	G	G	P	I	L	M	S	A	I	A	G	I	D	Q	A	L	W	D	I	K	G	K	V	L	N	A	P	V	W	Q	L	M	G	G	L	V	R	D	K	I	K	A	Y	S	W	V	G	G	D	R	P	A	D	V	I	D	G	I	K	T	L	R
Query Conservation
Alig confidence																				.	.	.	.	.
Template Conservation																				.	.	.	.	.
Template Sequence		P	R	Q	H	D	R	I	W	D	R	M	R	D	T	L	K	G	H	.	.	.	.	.	R	D	A	R	A	A	L	D	I	A	C	W	D	I	A	A	Q	A	A	G	L	P	L	C	D	M	T	G	G	R	V	A	G	P	V	P	V	I	S	S	I	G	G	D	T	P	E	A	M	R	A	K	V	A	R	H	R
Template Known Secondary structure		T	T														S	S		.	.	.	.	.																				T		B	G	G	G	T	T	T				S	S		B								S
Template Predicted Secondary structure																				.	.	.	.	.
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.						.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
		137	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	I	G	F	D	T	F	K	L	N	G	C	E	E	L	G	L	I	D	N	S	R	A	V	D	A	A	V	N	T	V	A	Q	I	R	E	A	F	G	N	Q	I	E	F	G	L	D	F	H	G	R	V	S	A	P	M	A	K	V	L	I	K	E	L	E	P	Y	R	P	L	F	I	E	E	P	V	L	A	E	Q
Query Conservation
Alig confidence																		.	.	.	.																																																										.	.
Template Conservation																		.	.	.	.																																																										.	.
Template Sequence		A	Q	G	F	K	G	H	S	I	K	I	G	A	S	E	A	.	.	.	.	E	G	G	P	A	L	D	A	E	R	I	T	A	C	L	A	D	R	Q	P	G	E	W	Y	L	A	D	A	N	N	G	L	T	V	E	H	A	L	R	M	L	S	L	L	P	P	G	L	D	I	V	L	E	A	P	C	A	.	.	S
Template Known Secondary structure				T												T	T	.	.	.	.	T	T														T	T			T	T								T	T														S		S	S										S	.	.	S
Template Predicted Secondary structure																		.	.	.	.																																																										.	.
Template SS confidence
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.					.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.			.
		217	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.		.	290	.	.	.	.	.
Predicted Secondary structure																																																																										.
Query SS confidence																																																																										.
Query Sequence		A	E	Y	Y	P	K	L	A	A	Q	T	H	I	P	L	A	A	G	E	R	M	F	S	R	F	D	F	K	R	V	L	E	A	G	G	I	S	I	L	Q	P	D	L	S	H	A	G	G	I	T	E	C	Y	K	I	A	G	M	A	E	A	Y	D	V	T	L	A	P	H	C	P	L	.	G	P	I	A	L	A	A
Query Conservation																																																																										.
Alig confidence																																																																										.
Template Conservation
Template Sequence		W	A	E	T	K	S	L	R	A	R	C	A	L	P	L	L	L	D	E	L	I	Q	T	E	T	D	L	I	A	A	I	R	D	D	L	C	D	G	V	G	L	K	V	S	K	Q	G	G	I	T	P	M	L	R	Q	R	A	I	A	A	A	A	G	M	V	M	S	V	Q	D	T	V	G	S	Q	I	S	F	A	A
Template Known Secondary structure										T	T			S					S	T	T			S										T	T			S										T	S															T								S	S
Template Predicted Secondary structure
Template SS confidence
		230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.
		296	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	L	H	I	D	F	V	S	Y	N	A	V	L	Q	E	Q	S	M	G	I	H	Y	N	K	G	A	E	L	L	D	F	V	K	N	K	E	D	F	S	M	V	G	G	F	F	K	P	L	T	K	P	G	L	G	V	E	I	D	E	A	K	V	I	E	F	S	K
Query Conservation
Alig confidence																					.	.	.	.	.	.
Template Conservation																					.	.	.	.	.	.
Template Sequence		I	L	H	L	A	Q	S	T	P	R	H	L	L	R	C	A	L	D	T	.	.	.	.	.	.	R	A	M	T	T	A	E	L	A	E	I	D	A	P	L	R	D	G	G	A	S	A	P	S	D	P	G	L	G	L	R	V	N	R	D	A	L	G	T	P	V	K
Template Known Secondary structure								T	S		T	T	T							G	.	.	.	.	.	.	G	G	T	B				S							S	B	T	T	B	B					S	S	B	T						G	G	G	T		S		S
Template Predicted Secondary structure																					.	.	.	.	.	.
Template SS confidence
		310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.							.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions