Job Description Q6BF17 Confidence 100.00% Date Thu Jan 5 12:37:31 GMT 2012 Rank 85 Aligned Residues 317 % Identity 21% Template c3dfyJ_ PDB info PDB header:isomerase Chain: J: PDB Molecule:muconate cycloisomerase; PDBTitle: crystal structure of apo dipeptide epimerase from2 thermotoga maritima Resolution 2.10 Å

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		2	.	.	.	.	.	.	.	10	.	.	.							.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.						.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Predicted Secondary structure														.	.	.	.	.	.																								.	.	.	.	.
Query SS confidence														.	.	.	.	.	.																								.	.	.	.	.
Query Sequence		K	I	T	K	I	T	T	Y	R	L	P	P	.	.	.	.	.	.	R	W	M	F	L	K	I	E	T	D	E	G	V	V	G	W	G	E	P	V	I	E	G	.	.	.	.	.	R	A	R	T	V	E	A	A	V	H	E	L	G	D	Y	L	I	G	Q	D	P	S	R	I	N	D	L	W	Q	V	M	Y	R	A
Query Conservation														.	.	.	.	.	.																								.	.	.	.	.
Alig confidence														.	.	.	.	.	.																								.	.	.	.	.
Template Conservation
Template Sequence		R	I	V	N	V	K	L	S	L	K	R	Y	E	Y	E	K	E	S	R	N	V	E	V	E	I	V	L	E	S	G	V	K	G	Y	G	E	A	S	P	S	F	R	V	N	G	E	R	V	E	A	L	L	A	I	E	N	A	V	R	E	M	I	T	G	I	D	V	R	N	Y	A	R	I	F	E	I	T	D	R	L
Template Known Secondary structure															B														T	T	S																								T									T	T			G	G	G									T	T
Template Predicted Secondary structure
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		71	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150
Predicted Secondary structure
Query SS confidence
Query Sequence		G	F	Y	R	G	G	P	I	L	M	S	A	I	A	G	I	D	Q	A	L	W	D	I	K	G	K	V	L	N	A	P	V	W	Q	L	M	G	G	L	V	R	D	K	I	K	A	Y	S	W	V	G	G	D	R	P	A	D	V	I	D	G	I	K	T	L	R	E	I	G	F	D	T	F	K	L	N	G	C	E	E
Query Conservation
Alig confidence					.	.	.	.	.	.																															.																																								.
Template Conservation					.	.	.	.	.	.																															.																																								.
Template Sequence		F	G	F	.	.	.	.	.	.	P	S	L	K	A	A	V	Q	F	A	T	L	D	A	L	S	Q	E	L	G	T	Q	V	C	Y	L	L	G	G	K	.	R	D	E	I	E	T	D	K	T	V	G	I	D	T	V	E	N	R	V	K	E	A	K	K	I	F	E	E	G	F	R	V	I	K	I	K	V	G	E	.
Template Known Secondary structure		T	T	S	.	.	.	.	.	.																			T	T	S						T	T			.		S				B						S																T	T										S	.
Template Predicted Secondary structure					.	.	.	.	.	.																															.																																								.
Template SS confidence
		93	.	.							.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.		.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
		151	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.			.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																						.	.
Query SS confidence																																																						.	.
Query Sequence		L	G	L	I	D	N	S	R	A	V	D	A	A	V	N	T	V	A	Q	I	R	E	A	F	G	N	Q	I	E	F	G	L	D	F	H	G	R	V	S	A	P	M	A	K	V	L	I	K	E	L	E	P	.	.	Y	R	P	L	F	I	E	E	P	V	L	A	E	Q	A	E	Y	Y	P	K	L	A	A	Q	T	H
Query Conservation																																																						.	.
Alig confidence		.	.	.	.	.	.	.	.															.																														.	.
Template Conservation		.	.	.	.	.	.	.	.															.
Template Sequence		.	.	.	.	.	.	.	.	N	L	K	E	D	I	E	A	V	E	E	I	A	K	.	V	T	R	G	A	K	Y	I	V	D	A	N	M	G	Y	T	Q	K	E	A	V	E	F	A	R	A	V	Y	Q	K	G	I	D	I	A	V	Y	E	Q	P	V	R	R	E	D	I	E	G	L	K	F	V	R	F	H	S	P
Template Known Secondary structure		.	.	.	.	.	.	.	.															.	T	S	T	T								T	T		S															T	T				S						S		T	T													S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.															.
Template SS confidence
										165	.	.	.	.	170	.	.	.	.	.	.	.	.		.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
		229	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.		.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.
Predicted Secondary structure																																																														.
Query SS confidence																																																														.
Query Sequence		I	P	L	A	A	G	E	R	M	F	S	R	F	D	F	K	R	V	L	E	A	G	G	I	S	I	L	Q	P	D	L	S	H	A	G	G	I	T	E	C	Y	K	I	A	G	M	A	E	A	Y	D	V	T	L	A	P	H	C	P	L	.	G	P	I	A	L	A	A	C	L	H	I	D	F	V	S	Y	N	A	V
Query Conservation																																																														.
Alig confidence																																			.																											.
Template Conservation																																			.
Template Sequence		F	P	V	A	A	D	E	S	A	R	T	K	F	D	V	M	R	L	V	K	E	E	A	V	D	Y	V	N	I	K	L	M	K	.	S	G	I	S	D	A	L	A	I	V	E	I	A	E	S	S	G	L	K	L	M	I	G	C	M	G	E	S	S	L	G	I	N	Q	S	V	H	F	A	L	G	T	G	A	F	E
Template Known Secondary structure		S					S	T	T		S	S										T	T			S									.															T	T	T								S	S																				S
Template Predicted Secondary structure																																			.
Template SS confidence
		236	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.		.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.
		308	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	Q	E	Q	S	M	G	I	H	Y	N	K	G	A	E	L	L	D	F	V	K	N	K	E	D	F	S	M	V	G	G	F	F	K	P	L	T	K	P	G	L	G	V	E
Query Conservation
Alig confidence						.	.	.	.	.	.	.																.	.	.	.	.	.	.	.
Template Conservation						.	.	.	.	.	.	.																.	.	.	.	.	.	.	.
Template Sequence		F	H	D	L	.	.	.	.	.	.	.	D	S	H	L	M	L	K	E	E	V	F	R	G	K	F	.	.	.	.	.	.	.	.	I	Q	D	G	P	R	M	R	V	K
Template Known Secondary structure						.	.	.	.	.	.	.						B			S	S				S	S	.	.	.	.	.	.	.	.				T	T
Template Predicted Secondary structure						.	.	.	.	.	.	.																.	.	.	.	.	.	.	.
Template SS confidence
		315	.	.	.								.	320	.	.	.	.	.	.	.	.	.	330	.	.	.									.	.	.	.	.	.	340	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions