Job Description Q6BF17 Confidence 100.00% Date Thu Jan 5 12:37:31 GMT 2012 Rank 53 Aligned Residues 341 % Identity 27% Template c3cb3B_ PDB info PDB header:isomerase Chain: B: PDB Molecule:mandelate racemase/muconate lactonizing enzyme; PDBTitle: crystal structure of l-talarate dehydratase from polaromonas sp. js6662 complexed with mg and l-glucarate Resolution 2.00 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.											.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.		.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Predicted Secondary structure																.	.	.	.	.	.	.	.	.	.																					.
Query SS confidence																.	.	.	.	.	.	.	.	.	.																					.
Query Sequence		K	I	T	K	I	T	T	Y	R	L	P	P	R	W	.	.	.	.	.	.	.	.	.	.	M	F	L	K	I	E	T	D	E	G	V	V	G	W	G	E	P	V	I	E	.	G	R	A	R	T	V	E	A	A	V	H	E	L	G	D	Y	L	I	G	Q	D	P	S	R	I	N	D	L	W	Q	V	M	Y	R	A
Query Conservation																.	.	.	.	.	.	.	.	.	.																					.
Alig confidence																.	.	.	.	.	.	.	.	.	.																					.
Template Conservation
Template Sequence		R	I	T	W	V	R	I	S	S	C	Y	L	P	L	A	T	P	I	M	T	E	I	A	I	L	F	A	E	I	E	T	A	G	G	H	Q	G	L	G	F	S	Y	S	K	R	A	G	G	P	G	Q	F	A	H	A	R	E	I	A	P	A	L	I	G	E	D	P	S	D	I	A	K	L	W	D	K	L	C	W	A
Template Known Secondary structure																S	S																T	T	S										S	S	T	T												G	G	G	G	T	T	S		T	T
Template Predicted Secondary structure
Template SS confidence
		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
		71	.	.	.	.		.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.				.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.
Predicted Secondary structure							.																																																.	.	.
Query SS confidence							.																																																.	.	.
Query Sequence		G	F	Y	R	G	.	G	P	I	L	M	S	A	I	A	G	I	D	Q	A	L	W	D	I	K	G	K	V	L	N	A	P	V	W	Q	L	M	G	G	L	V	R	D	K	I	K	A	Y	S	W	V	G	G	.	.	.	D	R	P	A	D	V	I	D	G	I	K	T	L	R	E	I	G	F	D	T	F	K	L	N
Query Conservation							.																																																.	.	.
Alig confidence							.																																			.													.	.	.
Template Conservation																																										.
Template Sequence		G	A	S	A	G	R	S	G	L	S	T	Q	A	I	G	A	F	D	V	A	L	W	D	L	K	A	K	R	A	G	L	S	L	A	K	L	L	G	S	Y	.	R	D	S	V	R	C	Y	N	T	S	G	G	F	L	H	T	P	I	D	Q	L	M	V	N	A	S	A	S	I	E	R	G	I	G	G	I	K	L	K
Template Known Secondary structure		T	G	G	G		S	S	S																						T		B								S	.		S						B		T	T			T	T	S															T	T
Template Predicted Secondary structure																																										.
Template SS confidence
		104	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.		.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.
		147	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	C	E	E	L	G	L	I	D	N	S	R	A	V	D	A	A	V	N	T	V	A	Q	I	R	E	A	F	G	N	Q	I	E	F	G	L	D	F	H	G	R	V	S	A	P	M	A	K	V	L	I	K	E	L	E	P	Y	R	P	L	F	I	E	E	P	V	L	A	E	Q	A	E	Y	Y	P	K	L	A	A	Q
Query Conservation
Alig confidence						.	.	.	.	.	.	.	.
Template Conservation						.	.	.	.	.	.	.	.
Template Sequence		V	G	Q	P	.	.	.	.	.	.	.	.	D	G	A	L	D	I	A	R	V	T	A	V	R	K	H	L	G	D	A	V	P	L	M	V	D	A	N	Q	Q	W	D	R	P	T	A	Q	R	M	C	R	I	F	E	P	F	N	L	V	W	I	E	E	P	L	D	A	Y	D	H	E	G	H	A	A	L	A	L	Q
Template Known Secondary structure					S	.	.	.	.	.	.	.	.																		T	T	S							T	T															G	G	G			S						S		T	T
Template Predicted Secondary structure						.	.	.	.	.	.	.	.
Template SS confidence
		183	.	.	.									.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.
		227	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	H	I	P	L	A	A	G	E	R	M	F	S	R	F	D	F	K	R	V	L	E	A	G	G	I	S	I	L	Q	P	D	L	S	H	A	G	G	I	T	E	C	Y	K	I	A	G	M	A	E	A	Y	D	V	T	L	A	P	H	C	P	L	G	P	I	A	L	A	A	C	L	H	I	D	F	V	S	Y	N	A
Query Conservation
Alig confidence																																																															.	.	.	.	.
Template Conservation																																																															.	.	.	.	.
Template Sequence		F	D	T	P	I	A	T	G	E	M	L	T	S	A	A	E	H	G	D	L	I	R	H	R	A	A	D	Y	L	M	P	D	A	P	R	V	G	G	I	T	P	F	L	K	I	A	S	L	A	E	H	A	G	L	M	L	A	P	H	F	A	.	.	.	.	.	M	E	L	H	V	H	L	A	A	A	Y	P	R	E
Template Known Secondary structure			S	S						T	T			S											T			S										T	S														T	T							S		.	.	.	.	.										T	S	S	S
Template Predicted Secondary structure																																																															.	.	.	.	.
Template SS confidence
		255	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.						.	.	.	.	320	.	.	.	.	.	.	.	.	.
		307	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	L	Q	E	Q	S	M	G	I	H	Y	N	K	G	A	E	L	L	D	F	V	K	N	K	E	D	F	S	M	V	G	G	F	F	K	P	L	T	K	P	G	L	G	V	E	I	D	E	A	K	V	I	E	F	S	K	N	A	P	D
Query Conservation
Alig confidence									.	.	.	.	.	.	.	.	.	.
Template Conservation									.	.	.	.	.	.	.	.	.	.
Template Sequence		P	W	V	E	H	F	E	.	.	.	.	.	.	.	.	.	.	W	L	E	P	L	F	N	E	R	I	E	I	R	D	G	R	M	L	V	P	T	R	P	G	L	G	L	T	L	S	G	Q	V	K	A	W	T	R	E	E	A	Q	V
Template Known Secondary structure									.	.	.	.	.	.	.	.	.	.	T	T	G	G	G	B	S							T	T							S	S	B	T				B		T
Template Predicted Secondary structure									.	.	.	.	.	.	.	.	.	.
Template SS confidence
		330	.	.	.	.	.	.											.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions