Job Description Q6BF17 Confidence 100.00% Date Thu Jan 5 12:37:31 GMT 2012 Rank 95 Aligned Residues 311 % Identity 14% Template c3cawB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:o-succinylbenzoate synthase; PDBTitle: crystal structure of o-succinylbenzoate synthase from2 bdellovibrio bacteriovorus liganded with mg Resolution 1.87 Å

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		2	.	.	.	.	.	.	.	10	.	.	.			.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.			.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
Predicted Secondary structure														.	.																								.	.
Query SS confidence														.	.																								.	.
Query Sequence		K	I	T	K	I	T	T	Y	R	L	P	P	.	.	R	W	M	F	L	K	I	E	T	D	E	G	V	V	G	W	G	E	P	V	I	E	G	.	.	R	A	R	T	V	E	A	A	V	H	E	L	G	D	Y	L	I	G	Q	D	P	S	R	I	N	D	L	W	Q	V	M	Y	R	A	G	F	Y	R	G	G	P
Query Conservation														.	.																								.	.
Alig confidence														.	.																								.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	I	S	Y	S	P	Y	T	L	K	P	V	A	R	E	G	V	L	L	K	V	E	W	N	D	G	L	Y	G	F	A	D	L	H	P	W	P	E	L	G	D	L	S	L	E	E	Q	L	S	D	L	R	M	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	R
Template Known Secondary structure												B													T	T	S											G	G	G	T													T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T
Template Predicted Secondary structure																																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.																										.	.
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	L	M	S	A	I	A	G	I	D	Q	A	L	W	D	I	K	G	K	V	L	N	A	P	V	W	Q	L	M	G	G	L	V	R	D	K	I	K	A	Y	S	W	V	G	G	D	R	P	A	D	V	I	D	G	I	K	T	L	R	E	I	G	F	D	T	F	K	L	N	G	C	E	E	L	G	L	I	D	N	S
Query Conservation
Alig confidence																																	.	.	.	.	.	.																																				.	.	.	.	.	.	.	.
Template Conservation																																	.	.	.	.	.	.																																				.	.	.	.	.	.	.	.
Template Sequence		M	T	T	Q	I	E	Q	S	I	W	L	A	R	R	D	A	L	L	R	K	E	K	K	H	V	F	D	G	G	E	K	.	.	.	.	.	.	I	K	N	N	Y	L	L	S	H	F	Q	D	L	K	P	G	F	L	D	G	L	K	N	E	G	Y	N	T	V	K	V	K	M	G	R	.	.	.	.	.	.	.	.
Template Known Secondary structure																							T		B	T	T	T	T	S			.	.	.	.	.	.			B						T	T	S				T	T								T	T									S	S	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																	.	.	.	.	.	.																																				.	.	.	.	.	.	.	.
Template SS confidence
		68	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.							.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	A	V	D	A	A	V	N	T	V	A	Q	I	R	E	A	F	G	N	Q	I	E	F	G	L	D	F	H	G	R	V	S	A	P	M	A	K	V	L	I	K	E	L	E	P	Y	R	P	L	F	I	E	E	P	V	L	A	E	Q	A	E	Y	Y	P	K	L	A	A	Q	T	H	I	P	L	A	A	G	E	R	M
Query Conservation
Alig confidence		.														.	.	.
Template Conservation		.														.	.	.
Template Sequence		.	D	L	Q	K	E	A	D	M	L	T	H	I	A	.	.	.	A	S	G	M	R	M	R	L	D	F	N	A	L	G	S	W	Q	T	F	E	K	F	M	V	N	L	P	L	T	V	R	P	L	I	E	Y	V	E	D	P	F	P	F	D	F	H	A	W	G	E	A	R	K	L	A	K	I	A	L	D	N	Q	Y
Template Known Secondary structure		.														.	.	.		T	T								T	T		S												S		T	T	T	G	G	G								S	S										T	T	T	S					S	T	T	G
Template Predicted Secondary structure		.														.	.	.
Template SS confidence
			134	.	.	.	.	.	140	.	.	.	.	.	.				.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.
		238	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.		.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.
Predicted Secondary structure																																																					.
Query SS confidence																																																					.
Query Sequence		F	S	R	F	D	F	K	R	V	L	E	A	G	G	I	S	I	L	Q	P	D	L	S	H	A	G	G	I	T	E	C	Y	K	I	A	G	M	A	E	A	Y	D	V	T	L	A	P	H	C	P	L	.	G	P	I	A	L	A	A	C	L	H	I	D	F	V	S	Y	N	A	V	L	Q	E	Q	S	M	G	I	H
Query Conservation																																																					.
Alig confidence											.	.												.	.	.	.																										.																										.	.
Template Conservation											.	.												.	.	.	.																																																				.	.
Template Sequence		D	K	V	P	W	G	K	I	A	.	.	S	A	P	F	D	V	I	V	I	K	P	.	.	.	.	A	K	T	D	V	D	K	A	V	A	Q	C	Q	K	W	N	L	K	L	A	V	T	S	Y	M	D	H	P	V	G	V	V	H	A	V	G	V	A	M	E	L	K	D	K	Y	G	D	M	I	L	E	.	.	S
Template Known Secondary structure		G	G	S		G	G	G		S	.	.	S		S		S						T	.	.	.	.	T	T	S												T	T						B			S																					G	G	G	B			.	.	B
Template Predicted Secondary structure											.	.												.	.	.	.																																																				.	.
Template SS confidence
		210	.	.	.	.	.	.	.	.			.	220	.	.	.	.	.	.	.	.	.					230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280			.
		317	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	N	K	G	A	E	L	L	D	F	V	K	N	K	E	D	F	S	M	V	G	G	F	F	K	P	L	T	K	P	G	L	G	V	E	I	D	E	A	K	V	I	E	F	S	K	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	C	L	T	H	R	L	Y	Q	M	D	S	F	A	A	E	L	S	T	Q	G	P	Y	L	L	K	N	K	G	T	G	V	G	F	D	K	L	L	E	A	L	T	W	Y	Q	L	K
Template Known Secondary structure		B				G	G	G	B				T	T	G	G	G					T	T						S	S	S	B	T	S								S
Template Predicted Secondary structure
Template SS confidence
		282	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions