Job Description Q6BF17 Confidence 100.00% Date Thu Jan 5 12:37:31 GMT 2012 Rank 10 Aligned Residues 353 % Identity 32% Template c3bsmD_ PDB info PDB header:lyase Chain: D: PDB Molecule:mandelate racemase/muconate lactonizing enzyme; PDBTitle: crystal structure of d-mannonate dehydratase from2 chromohalobacter salexigens Resolution 2.20 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.			.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.		.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
Predicted Secondary structure															.	.																																			.
Query SS confidence															.	.																																			.
Query Sequence		M	K	I	T	K	I	T	T	Y	R	L	P	P	.	.	R	W	M	F	L	K	I	E	T	D	E	G	V	V	G	W	G	E	P	V	I	E	G	R	A	R	T	V	E	A	A	V	H	E	.	L	G	D	Y	L	I	G	Q	D	P	S	R	I	N	D	L	W	Q	V	M	Y	R	A	G	F	Y	R	G	G	P
Query Conservation															.	.																																			.
Alig confidence															.	.																																			.
Template Conservation
Template Sequence		L	K	I	R	D	A	Y	T	I	V	T	C	P	G	R	N	F	V	T	L	K	I	V	T	E	S	G	T	H	G	I	G	D	A	T	L	N	G	R	E	M	A	V	A	A	Y	L	D	E	H	V	V	P	A	L	I	G	R	D	A	G	R	I	E	D	T	W	Q	Y	L	Y	R	G	A	Y	W	R	R	G	P
Template Known Secondary structure			B											S	S	S										T	T	S										T	T												T						T	T	S	B	T	T													T	T	S
Template Predicted Secondary structure
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	L	M	S	A	I	A	G	I	D	Q	A	L	W	D	I	K	G	K	V	L	N	A	P	V	W	Q	L	M	G	G	L	V	R	D	K	I	K	A	Y	S	W	V	G	G	D	R	P	A	D	V	I	D	G	I	K	T	L	R	E	I	G	F	D	T	F	K	L	N	G	C	E	E	L	G	L	I	D	N	S
Query Conservation
Alig confidence																																																																																.	.
Template Conservation																																																																																.	.
Template Sequence		V	T	M	T	A	I	A	A	V	D	M	A	L	W	D	I	K	A	K	A	A	G	M	P	L	Y	Q	L	L	G	G	K	S	R	E	R	V	M	T	Y	A	H	C	T	G	Q	T	I	E	D	C	L	G	E	V	A	R	H	V	E	L	G	Y	R	A	V	R	V	Q	S	G	V	P	G	S	T	E	K	.	.
Template Known Secondary structure																							T	S	B						T			S		S	S										S	S														T	T		S															.	.
Template Predicted Secondary structure																																																																																.	.
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	A	V	D	A	A	V	N	T	V	A	Q	I	R	E	A	F	G	N	Q	I	E	F	G	L	D	F	H	G	R	V	S	A	P	M	A	K	V	L	I	K	E	L	E	P	Y	R	P	L	F	I	E	E	P	V	L	A	E	Q	A	E	Y	Y	P	K	L	A	A	Q	T	H	I	P	L	A	A	G	E	R	M
Query Conservation
Alig confidence		.
Template Conservation		.
Template Sequence		.	Y	L	N	H	A	P	K	L	F	A	A	V	R	E	R	F	G	D	D	L	H	V	L	H	D	V	H	H	R	L	T	P	I	E	A	A	R	L	G	K	A	V	E	P	Y	H	L	F	W	L	E	D	C	V	P	A	E	N	Q	E	S	L	R	L	I	R	E	H	T	T	T	P	L	A	I	G	E	V	F
Template Known Secondary structure		.																		S	S	S							T	T		S												T	G	G	G			S						S			S	S	G	G	G	G									S						T	T
Template Predicted Secondary structure		.
Template SS confidence
			189	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.
		238	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.			.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.
Predicted Secondary structure																																																					.	.
Query SS confidence																																																					.	.
Query Sequence		F	S	R	F	D	F	K	R	V	L	E	A	G	G	I	S	I	L	Q	P	D	L	S	H	A	G	G	I	T	E	C	Y	K	I	A	G	M	A	E	A	Y	D	V	T	L	A	P	H	C	P	L	.	.	G	P	I	A	L	A	A	C	L	H	I	D	F	V	S	Y	N	A	V	L	Q	E	Q	S	M	G	I
Query Conservation																																																					.	.
Alig confidence																																																					.	.																								.	.	.	.
Template Conservation																																																																														.	.	.	.
Template Sequence		N	S	I	H	D	C	R	E	L	I	Q	N	Q	W	I	D	Y	I	R	M	P	L	T	H	G	G	G	I	T	A	M	R	R	V	A	D	L	A	S	L	Y	H	V	R	T	G	F	H	G	P	T	D	L	S	P	V	C	L	G	A	A	I	H	F	D	T	W	V	P	N	F	G	I	Q	E	H	.	.	.	.
Template Known Secondary structure			S	G	G	G	T						T	T			S						T	T	T	T	T															T	T									T	T	S																T	T	B						.	.	.	.
Template Predicted Secondary structure																																																																														.	.	.	.
Template SS confidence
		268	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.
		316	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	Y	N	K	G	A	E	L	L	D	F	V	K	N	K	E	D	F	S	M	V	G	G	F	F	K	P	L	T	K	P	G	L	G	V	E	I	D	E	A	K	V	I	E	F	S	K	N
Query Conservation
Alig confidence		.	.	.
Template Conservation		.	.	.
Template Sequence		.	.	.	M	P	H	T	D	E	T	D	A	V	F	P	H	D	Y	R	F	E	D	G	H	F	L	A	G	E	S	P	G	H	G	V	D	I	D	E	E	L	A	A	K	Y	P	Y	E
Template Known Secondary structure		.	.	.											S		B						T	T							S	S	B	T	S	B									T	S
Template Predicted Secondary structure		.	.	.
Template SS confidence
					344	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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