Job Description Q6BF17 Confidence 26.88% Date Thu Jan 5 12:37:31 GMT 2012 Rank 449 Aligned Residues 146 % Identity 15% Template c3bolB_ PDB info PDB header:transferase Chain: B: PDB Molecule:5-methyltetrahydrofolate s-homocysteine PDBTitle: cobalamin-dependent methionine synthase (1-566) from2 thermotoga maritima complexed with zn2+ Resolution 1.85 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		123	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	R	P	A	D	V	I	D	G	I	K	T	L	R	E	I	G	F	D	T	F	K	L	N	G	C	E	E	L	G	L	I	D	N	S	R	A	V	D	A	A	V	N	T	V	A	Q	I	R	E	A	F	G	N	Q	I	E	F	G	L	D	F	H	G	R	V	S	A	P	M	A	K	V	L	I	K	E	L	E	P
Query Conservation
Alig confidence																															.	.	.	.	.																			.	.								.	.	.
Template Conservation																															.	.	.	.	.																			.	.								.	.	.
Template Sequence		G	N	E	E	I	V	I	K	E	A	K	T	Q	V	E	K	G	A	E	V	L	D	V	N	F	G	I	E	S	.	.	.	.	.	Q	I	D	V	R	Y	V	E	K	I	V	Q	T	L	P	Y	V	S	.	.	N	V	P	L	S	L	D	.	.	.	I	Q	N	V	D	L	T	E	R	A	L	R	A	Y	P	G
Template Known Secondary structure		T															T	T		S							S	S	G	G	.	.	.	.	.	G	S																T	.	.		S						.	.	.															S	S
Template Predicted Secondary structure																															.	.	.	.	.																			.	.								.	.	.
Template SS confidence
		337	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.						.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.			.	.	.	.	.	.	390				.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.
		203	.	.	.				.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.																240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260
Predicted Secondary structure						.	.	.																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.
Query SS confidence						.	.	.																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.
Query Sequence		Y	R	P	L	.	.	.	F	I	E	E	P	V	L	A	E	Q	A	E	Y	Y	P	K	L	A	A	Q	T	H	I	P	L	A	A	G	E	R	M	F	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	F	D	F	K	R	V	L	E	A	G	G	I	S	I	L	Q	P	D	L	S	.	.	.	.
Query Conservation						.	.	.																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.
Alig confidence						.	.	.				.	.	.	.																					.	.	.				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.
Template Conservation												.	.	.	.																					.	.	.
Template Sequence		R	S	L	F	N	S	A	K	V	D	.	.	.	.	E	E	E	L	E	M	K	I	N	L	L	K	K	Y	G	G	T	L	I	V	.	.	.	L	L	M	G	K	D	V	P	K	S	F	E	E	R	K	E	Y	F	E	K	A	L	K	I	L	E	R	H	D	F	S	D	R	V	I	F	D	P	G	V	L	P	L
Template Known Secondary structure										S		.	.	.	.																					.	.	.		S		S	S	S				S																		T	T		T	T	S										G
Template Predicted Secondary structure												.	.	.	.																					.	.	.
Template SS confidence
		407	.	.	410	.	.	.	.	.	.					.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.				.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.
			261	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.
Predicted Secondary structure		.
Query SS confidence		.
Query Sequence		.	H	A	G	G	I	T	E	C	Y	K	I	A	G	M	A	E	A	Y	D	V	T	L	A	P	H
Query Conservation		.
Alig confidence		.
Template Conservation
Template Sequence		G	A	E	G	K	P	V	E	V	L	K	T	I	E	F	I	S	S	K	G	F	N	T	T	V	G
Template Known Secondary structure		G	G	T																T	T			B			B
Template Predicted Secondary structure
Template SS confidence
		480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions