Job Description Q6BF17 Confidence 100.00% Date Thu Jan 5 12:37:31 GMT 2012 Rank 29 Aligned Residues 353 % Identity 29% Template c3bjsB_ PDB info PDB header:structural genomics, unknown function Chain: B: PDB Molecule:mandelate racemase/muconate lactonizing enzyme; PDBTitle: crystal structure of a member of enolase superfamily from polaromonas2 sp. js666 Resolution 2.70 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.																.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.		.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.
Predicted Secondary structure															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																			.
Query SS confidence															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																			.
Query Sequence		M	K	I	T	K	I	T	T	Y	R	L	P	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	W	M	F	L	K	I	E	T	D	E	G	V	V	G	W	G	E	P	V	I	E	G	R	A	R	T	V	E	A	A	V	H	E	.	L	G	D	Y	L	I	G	Q	D	P	S	R	I	N	D	L	W
Query Conservation															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																			.
Alig confidence															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																			.
Template Conservation
Template Sequence		M	K	I	T	K	I	N	A	I	P	L	S	Y	R	L	P	T	V	T	M	G	V	G	S	T	I	K	R	D	A	I	I	I	R	V	E	T	S	E	G	I	T	G	Y	G	E	A	H	P	G	R	S	P	G	A	I	T	S	L	I	H	N	T	I	A	P	M	L	I	G	M	K	A	T	D	C	V	G	A	W
Template Known Secondary structure			B																			T	T																T	T	S										T	T												T	T	T	T	T	T	T	T	S	B	T	T
Template Predicted Secondary structure
Template SS confidence
		37	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.
		65	.	.	.	.	70	.	.	.	.	.	.	.	.			.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.			.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Predicted Secondary structure																.	.																																									.	.
Query SS confidence																.	.																																									.	.
Query Sequence		Q	V	M	Y	R	A	G	F	Y	R	G	G	P	I	.	.	L	M	S	A	I	A	G	I	D	Q	A	L	W	D	I	K	G	K	V	L	N	A	P	V	W	Q	L	M	G	G	L	V	R	D	K	I	K	A	Y	S	.	.	W	V	G	G	D	R	P	A	D	V	I	D	G	I	K	T	L	R	E	I	G	F
Query Conservation																.	.																																									.	.
Alig confidence																.	.																																									.	.
Template Conservation
Template Sequence		Q	R	V	H	R	M	Q	L	S	S	H	G	L	G	A	G	A	A	L	A	I	S	G	I	D	M	A	L	W	D	I	R	G	K	A	A	N	M	P	L	Y	E	L	L	G	G	S	K	R	R	I	P	A	Y	A	G	G	I	A	L	G	Y	Q	P	K	E	S	L	A	E	E	A	Q	E	Y	I	A	R	G	Y
Template Known Secondary structure								T	T	S	S	S	S		T																							T		B					T	T												S	S		S		S	S															T	T
Template Predicted Secondary structure
Template SS confidence
		120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.
		141	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220
Predicted Secondary structure
Query SS confidence
Query Sequence		D	T	F	K	L	N	G	C	E	E	L	G	L	I	D	N	S	R	A	V	D	A	A	V	N	T	V	A	Q	I	R	E	A	F	G	N	Q	I	E	F	G	L	D	F	H	G	R	V	S	A	P	M	A	K	V	L	I	K	E	L	E	P	Y	R	P	L	F	I	E	E	P	V	L	A	E	Q	A	E	Y	Y
Query Conservation
Alig confidence											.	.	.	.	.	.	.	.	.
Template Conservation											.	.	.	.	.	.	.	.	.
Template Sequence		K	A	L	K	L	R	I	G	D	.	.	.	.	.	.	.	.	.	A	A	R	V	D	I	E	R	V	R	H	V	R	K	V	L	G	D	E	V	D	I	L	T	D	A	N	T	A	Y	T	M	A	D	A	R	R	V	L	P	V	L	A	E	I	Q	A	G	W	L	E	E	P	F	A	C	N	D	F	A	S	Y
Template Known Secondary structure		S								S	.	.	.	.	.	.	.	.	.																		T	T	S							T	T																	T	T		S						S		T	T
Template Predicted Secondary structure											.	.	.	.	.	.	.	.	.
Template SS confidence
		200	.	.	.	.	.	.	.	.										.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270
		221	.	.	.	.	.	.		.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.
Predicted Secondary structure									.
Query SS confidence									.
Query Sequence		P	K	L	A	A	Q	T	.	H	I	P	L	A	A	G	E	R	M	F	S	R	F	D	F	K	R	V	L	E	A	G	G	I	S	I	L	Q	P	D	L	S	H	A	G	G	I	T	E	C	Y	K	I	A	G	M	A	E	A	Y	D	V	T	L	A	P	H	C	P	L	G	P	I	A	L	A	A	C	L	H	I
Query Conservation									.
Alig confidence									.
Template Conservation
Template Sequence		R	E	V	A	K	I	T	P	L	V	P	I	A	A	G	E	N	H	Y	T	R	F	E	F	G	Q	M	L	D	A	G	A	V	Q	V	W	Q	P	D	L	S	K	C	G	G	I	T	E	G	I	R	I	A	A	M	A	S	A	Y	R	I	P	I	N	A	H	S	S	A	T	G	L	N	H	A	A	T	I	H	F
Template Known Secondary structure					T	T	T		S	S	S						T	T																						B	T	T	T	S	S															T	T			B			B			S	S
Template Predicted Secondary structure
Template SS confidence
		271	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
		300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	F	V	S	Y	N	A	V	L	Q	E	Q	S	M	G	I	H	Y	N	K	G	A	E	L	L	D	F	V	K	N	K	E	D	F	S	M	V	G	G	F	F	K	P	L	T	K	P	G	L	G	V	E	I	D	E	A	K	V	I	E	F	S	K	N	A	P	D	W	R
Query Conservation
Alig confidence																	.	.	.	.	.	.
Template Conservation																	.	.	.	.	.	.
Template Sequence		L	A	A	T	E	N	A	G	Y	F	E	A	C	V	S	.	.	.	.	.	.	K	F	N	P	F	R	D	M	F	G	T	F	E	I	G	A	D	G	C	V	E	P	P	D	A	P	G	L	G	I	E	V	D	E	S	I	F	E	K	Y	P	A	V	D	G	P	G	Y
Template Known Secondary structure						T	T	B									.	.	.	.	.	.	S	S		T	T	T	T	S	S							T	T	S						S	S	S	B	T						G	G	G	T	T	T	S					S
Template Predicted Secondary structure																	.	.	.	.	.	.
Template SS confidence
		351	.	.	.	.	.	.	.	.	360	.	.	.	.	.							.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions