Job Description Q6BF17 Confidence 89.09% Date Thu Jan 5 12:37:31 GMT 2012 Rank 247 Aligned Residues 216 % Identity 15% Template c3bg3B_ PDB info PDB header:ligase Chain: B: PDB Molecule:pyruvate carboxylase, mitochondrial; PDBTitle: crystal structure of human pyruvate carboxylase (missing2 the biotin carboxylase domain at the n-terminus) Resolution 2.80 Å

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		124	.	.	.	.	.	130	.	.	.	.	.	.	.	.			.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.									.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.							.	.	.	.	.
Predicted Secondary structure																	.	.																								.	.	.	.	.	.	.	.																						.	.	.	.	.	.
Query SS confidence																	.	.																								.	.	.	.	.	.	.	.																						.	.	.	.	.	.
Query Sequence		R	P	A	D	V	I	D	G	I	K	T	L	R	E	I	.	.	G	F	D	T	F	K	L	N	G	C	E	E	L	G	L	I	D	N	S	R	A	V	D	.	.	.	.	.	.	.	.	A	A	V	N	T	V	A	Q	I	R	E	A	F	G	N	Q	I	E	F	G	L	.	.	.	.	.	.	D	F	H	G	R
Query Conservation																	.	.																								.	.	.	.	.	.	.	.																						.	.	.	.	.	.
Alig confidence																	.	.											.	.	.	.	.	.	.	.	.					.	.	.	.	.	.	.	.																						.	.	.	.	.	.
Template Conservation																													.	.	.	.	.	.	.	.	.
Template Sequence		R	T	H	D	L	K	K	I	A	P	Y	V	A	H	N	F	S	K	L	F	S	M	E	N	W	G	G	.	.	.	.	.	.	.	.	.	A	T	F	D	V	A	M	R	F	L	Y	E	C	P	W	R	R	L	Q	E	L	R	E	L	I	P	N	I	P	F	Q	M	L	L	R	G	A	N	A	V	G	Y	T	N
Template Known Secondary structure									T									T	T		S							T	.	.	.	.	.	.	.	.	.	T								T	S																S	S	S								G	G	G	T	T	S	S	S
Template Predicted Secondary structure																													.	.	.	.	.	.	.	.	.
Template SS confidence
		583	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.										610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.
		188	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.				.	.	230	.	.	.												.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.				250
Predicted Secondary structure																																										.	.	.							.	.	.	.	.	.	.	.	.	.	.																	.	.	.
Query SS confidence																																										.	.	.							.	.	.	.	.	.	.	.	.	.	.																	.	.	.
Query Sequence		V	S	A	P	M	A	K	V	L	I	K	E	L	E	P	Y	R	P	L	F	I	E	E	P	V	L	A	E	Q	A	E	Y	Y	P	K	L	A	A	Q	T	.	.	.	H	I	P	L	A	A	.	.	.	.	.	.	.	.	.	.	.	G	E	R	M	F	S	R	F	D	F	K	R	V	L	E	A	.	.	.	G
Query Conservation																																										.	.	.							.	.	.	.	.	.	.	.	.	.	.																	.	.	.
Alig confidence																																										.	.	.							.	.	.	.	.	.	.	.	.	.	.																	.	.	.
Template Conservation
Template Sequence		Y	P	D	N	V	V	F	K	F	C	E	V	A	K	E	N	G	M	D	V	F	R	V	F	D	S	L	N	Y	L	P	N	M	L	L	G	M	E	A	A	G	S	A	G	G	V	V	E	A	A	I	S	Y	T	G	D	V	A	D	P	S	R	T	K	Y	S	L	Q	Y	Y	M	G	L	A	E	E	L	V	R	A
Template Known Secondary structure																T	T	T									T	T																	T											S		T	T		T	T			S	S
Template Predicted Secondary structure
Template SS confidence
		654	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.
		251	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.			.	280	.	.	.	.	.	.	.	.		.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.
Predicted Secondary structure																														.	.											.
Query SS confidence																														.	.											.
Query Sequence		G	I	S	I	L	Q	P	D	L	S	H	A	G	G	I	T	E	C	Y	K	I	A	G	M	A	E	A	Y	.	.	D	V	T	L	A	P	H	C	P	L	.	G	P	I	A	L	A	A	C	L	H	I	D	F	V	S	Y	N	A	V	L	Q	E	Q	S	M	G	I	H	Y	N	K	G	A	E	L	L	D	F	V
Query Conservation																														.	.											.
Alig confidence																														.	.											.									.	.
Template Conservation																																																			.	.
Template Sequence		G	T	H	I	L	C	I	D	M	A	G	L	L	K	P	T	A	C	T	M	L	V	S	S	L	R	D	R	F	P	D	L	P	L	H	I	H	T	H	D	T	S	G	A	G	V	A	A	M	.	.	L	A	C	A	Q	A	G	A	D	V	V	D	V	A	A	D	S	M	S	G	M	T	S	Q	P	S	M	G	A
Template Known Secondary structure		T		S						T	T																	T	T		T	T	S									T	T	S							.	.						T	T		S					B		G	G	G		S	T	T	S			B
Template Predicted Secondary structure																																																			.	.
Template SS confidence
		734	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.			.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.
		328	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	N	K	E	D	F	S	M	V	G	G	F	F	K	P	L	T	K	P	G	L	G	V	E	I	D	E	A	K	V	I	E	F	S
Query Conservation
Alig confidence				.	.	.	.	.	.	.	.	.	.	.
Template Conservation				.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	V	.	.	.	.	.	.	.	.	.	.	.	A	C	T	R	G	T	P	L	D	T	E	V	P	M	E	R	V	F	D	Y	S
Template Known Secondary structure				.	.	.	.	.	.	.	.	.	.	.		T	T	T	T	S	T	T
Template Predicted Secondary structure				.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		813	.												.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions