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Job DescriptionQ6BF17
Confidence26.94%DateThu Jan 5 12:37:31 GMT 2012
Rank447Aligned Residues112
% Identity17%Templatec2zdsB_
PDB info PDB header:dna binding proteinChain: B: PDB Molecule:putative dna-binding protein; PDBTitle: crystal structure of sco6571 from streptomyces coelicolor2 a3(2)
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   175....180.........190.........200.........210... ......220.........230...
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Query Sequence  GNQIEFGLDFHGRVSAPMAKVLIKELEPYRPLFIEEPVL. . . . . . . . . . . . AEQAEYYPKLAAQTHIPLAA. . . . . . . . .
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Template Sequence  PRNFTLFTGQWADLPLEEV. . . CRLARDFGYDGLELACWGDHFEVDKALADPSYVDSRHQLLDKYGLKCWAISNHLVGQA
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GGGTTS
...T
SSSTTT


TTTT
B
S

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   1........10......... 20.........30.........40.........50.........60.........70.......
 
   234.....240.........250.........260.....
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . GERMFSRFDFKRVLEAGGISILQPDLSHAGGI. . . . . . . . . . . . . . . . . . . .
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Template Sequence  VCDAIIDERHEAILPARIWGDGDAEGVRQRAAAEIKDTARAAARLGVDTVIGFTGSAIWHLVAXFPPAPESXIERGYQDF
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SS
SS
TT

T





SSGGGTT

S


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   78.80.........90.........100.........110.........120.........130.........140.........150.......
 
   266...270.........280.........
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Query Sequence  . TECYKIAGMAEAYDVTLAPHCPLG
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Template Sequence  ADRWNPILDVFDAEGVRFAHEVHPS
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TT
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   158.160.........170.........180..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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