Job Description Q6BF17 Confidence 85.35% Date Thu Jan 5 12:37:31 GMT 2012 Rank 275 Aligned Residues 153 % Identity 10% Template c2rfgB_ PDB info PDB header:lyase Chain: B: PDB Molecule:dihydrodipicolinate synthase; PDBTitle: crystal structure of dihydrodipicolinate synthase from hahella2 chejuensis at 1.5a resolution Resolution 1.50 Å

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		114	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	K	A	Y	S	W	V	G	G	D	R	P	A	D	V	I	D	G	I	K	T	L	R	E	I	G	F	D	T	F	K	L	N	G	C	E	E	L	G	L	I	D	N	S	R	A	V	D	A	A	V	N	T	V	A	Q	I	R	E	A	F	G	N	Q	I	E	F	G	L	D	F	H	G	R	V	S	A	P	M	A
Query Conservation
Alig confidence																																												.	.	.																											.
Template Conservation																																												.	.	.																											.
Template Sequence		M	I	T	P	F	I	N	G	Q	V	D	E	K	A	L	A	G	L	V	D	W	Q	I	K	H	G	A	H	G	L	V	P	V	G	T	T	G	E	S	P	T	L	.	.	.	T	E	E	E	H	K	R	V	V	A	L	V	A	E	Q	A	Q	G	R	V	P	V	I	A	G	A	.	G	S	N	N	P	V	E	A
Template Known Secondary structure								T	T																	T	T		S				T	T	S	G	G	G	T	G	G	G	S	.	.	.																	T	T	S	S		B					.			S	S
Template Predicted Secondary structure																																												.	.	.																											.
Template SS confidence
		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50				.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.		.	.	.	80	.	.	.	.
		194	.	.	.	.	.	200	.	.	.	.	.	.								.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.							.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260
Predicted Secondary structure															.	.	.	.	.	.	.																											.	.	.	.	.	.
Query SS confidence															.	.	.	.	.	.	.																											.	.	.	.	.	.
Query Sequence		K	V	L	I	K	E	L	E	P	Y	R	P	L	.	.	.	.	.	.	.	F	I	E	E	P	V	L	A	E	Q	A	E	Y	Y	P	K	L	A	A	Q	T	H	I	P	L	A	.	.	.	.	.	.	A	G	E	R	M	F	S	R	F	D	F	K	R	V	L	E	A	G	G	I	S	I	L	Q	P	D	L	S
Query Conservation															.	.	.	.	.	.	.																											.	.	.	.	.	.
Alig confidence															.	.	.	.	.	.	.																											.	.	.	.	.	.
Template Conservation
Template Sequence		V	R	Y	A	Q	H	A	Q	Q	A	G	A	D	A	V	L	C	V	A	G	Y	Y	N	R	P	S	Q	E	G	L	Y	Q	H	F	K	M	V	H	D	A	I	D	I	P	I	I	V	Y	N	I	P	P	R	A	V	V	D	I	K	P	E	T	M	A	R	L	A	A	L	P	R	I	V	G	V	K	D	A	T	T
Template Known Secondary structure											T	T		S								T	T	T																			S	S												S													T	S	T	T								S
Template Predicted Secondary structure
Template SS confidence
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
		261	.	.	.	.	.	.	.	.	270
Predicted Secondary structure
Query SS confidence
Query Sequence		H	A	G	G	I	T	E	C	Y	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	L	A	R	I	S	R	E	R	M
Template Known Secondary structure			T	T							T
Template Predicted Secondary structure
Template SS confidence
		165	.	.	.	.	170	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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