Job Description Q6BF17 Confidence 100.00% Date Thu Jan 5 12:37:31 GMT 2012 Rank 108 Aligned Residues 293 % Identity 20% Template c2qvhB_ PDB info PDB header:lyase Chain: B: PDB Molecule:o-succinylbenzoate-coa synthase; PDBTitle: crystal structure of o-succinylbenzoate synthase complexed with o-2 succinyl benzoate (osb) Resolution 1.76 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.			.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																			.	.
Query SS confidence																																			.	.
Query Sequence		K	I	T	K	I	T	T	Y	R	L	P	P	R	W	M	F	L	K	I	E	T	D	E	G	V	V	G	W	G	E	P	V	I	.	.	E	G	R	A	R	T	V	E	A	A	V	H	E	L	G	D	Y	L	I	G	Q	D	P	S	R	I	N	D	L	W	Q	V	M	Y	R	A	G	F	Y	R	G	G	P	I	L
Query Conservation																																			.	.
Alig confidence																																			.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	A	F	A	I	P	L	R	T	R	F	R	G	I	T	V	R	E	G	X	L	V	R	G	A	A	G	W	G	E	F	S	P	F	A	E	Y	G	P	R	E	C	A	R	W	W	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure													T	T												S	S									T	T												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	S	A	I	A	G	I	D	Q	A	L	W	D	I	K	G	K	V	L	N	A	P	V	W	Q	L	M	G	G	L	V	R	D	K	I	K	A	Y	S	W	V	G	G	D	R	P	A	D	V	I	D	G	I	K	T	L	R	E	I	G	F	D	T	F	K	L	N	G	C	E	E	L	G	L	I	D	N	S	R	A
Query Conservation
Alig confidence		.	.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.																					.	.	.	.	.	.
Template Conservation		.	.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.																					.	.	.	.	.	.
Template Sequence		.	.	.	.	A	C	Y	E	A	A	E	L	G	.	.	.	.	.	.	.	.	.	.	.	.	.	W	P	A	P	V	R	D	T	V	P	V	N	A	T	V	P	A	V	G	P	E	E	A	.	.	.	A	R	I	V	A	S	S	G	C	T	T	A	K	V	K	V	A	E	R	G	.	.	.	.	.	.	Q	S
Template Known Secondary structure		.	.	.	.								T		.	.	.	.	.	.	.	.	.	.	.	.	.					S		S				B						S							.	.	.						T	T			S									T	T	.	.	.	.	.	.
Template Predicted Secondary structure		.	.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.																					.	.	.	.	.	.
Template SS confidence
						53	.	.	.	.	.	.	60	.														.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.				.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.							.	.
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	D	A	A	V	N	T	V	A	Q	I	R	E	A	F	G	N	Q	I	E	F	G	L	D	F	H	G	R	V	S	A	P	M	A	K	V	L	I	K	E	L	E	P	Y	R	P	L	F	I	E	E	P	V	L	A	E	Q	A	E	Y	Y	P	K	L	A	A	Q	T	H	I	P	L	A	A	G	E	R	M	F	S
Query Conservation
Alig confidence																																																								.	.
Template Conservation																																																								.	.
Template Sequence		E	A	N	D	V	A	R	V	E	A	V	R	D	A	L	G	P	R	G	R	V	R	I	D	V	N	G	A	W	D	V	D	T	A	V	R	X	I	R	L	L	D	R	F	E	L	E	Y	V	E	Q	P	C	A	.	.	T	V	D	E	L	A	E	V	R	R	R	V	S	V	P	I	A	A	D	E	S	I	R	R
Template Known Secondary structure																		T	T								T	T	B	S													G	G	G									B	S	.	.	S												S	S					S					S
Template Predicted Secondary structure																																																								.	.
Template SS confidence
		107	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160			.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.
		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.		.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																			.
Query SS confidence																																																			.
Query Sequence		R	F	D	F	K	R	V	L	E	A	G	G	I	S	I	L	Q	P	D	L	S	H	A	G	G	I	T	E	C	Y	K	I	A	G	M	A	E	A	Y	D	V	T	L	A	P	H	C	P	L	.	G	P	I	A	L	A	A	C	L	H	I	D	F	V	S	Y	N	A	V	L	Q	E	Q	S	M	G	I	H	Y	N
Query Conservation																																																			.
Alig confidence																																		.	.	.															.																											.	.	.	.
Template Conservation																																		.	.	.																																										.	.	.	.
Template Sequence		A	E	D	P	L	R	V	R	D	A	E	A	A	D	V	V	V	L	K	V	Q	P	L	G	G	V	R	A	A	L	R	L	.	.	.	A	E	E	C	G	L	P	V	V	V	S	S	A	V	E	T	S	V	G	L	A	A	G	V	A	L	A	A	A	L	P	E	L	P	Y	A	C	G	L	A	T	.	.	.	.
Template Known Secondary structure			S		T	T					T	T			S										T	S								.	.	.					T	S					B			S																S	S			S	S		B	B				.	.	.	.
Template Predicted Secondary structure																																		.	.	.																																										.	.	.	.
Template SS confidence
		185	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.				.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.
		319	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	G	A	E	L	L	D	F	V	K	N	K	E	D	F	S	M	V	G	G	F	F	K	P	L	T	K	P	G	L	G	V	E	I	D	E	A	K	V	I	E	F	S	K	N	A	P	D	W	R	N
Query Conservation
Alig confidence		.	.																									.	.	.	.	.
Template Conservation		.	.																									.	.	.	.	.
Template Sequence		.	.	L	R	L	L	H	A	D	V	C	D	D	P	L	L	P	V	H	G	V	L	P	V	R	R	.	.	.	.	.	V	D	V	S	E	Q	R	L	A	E	V	E	I	D	P	A	A	W	Q	A
Template Known Secondary structure		.	.	G	G	G	B	S			S	B	S	S					B	T	T							.	.	.	.	.			B
Template Predicted Secondary structure		.	.																									.	.	.	.	.
Template SS confidence
				258	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.						.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions