Job Description Q6BF17 Confidence 100.00% Date Thu Jan 5 12:37:31 GMT 2012 Rank 16 Aligned Residues 354 % Identity 25% Template c2qdeA_ PDB info PDB header:lyase Chain: A: PDB Molecule:mandelate racemase/muconate lactonizing enzyme family PDBTitle: crystal structure of mandelate racemase/muconate lactonizing family2 protein from azoarcus sp. ebn1 Resolution 1.93 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.						.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.				.	.	.	.	40	.	.	.	.	.	.	.	.	.	50						.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.
Predicted Secondary structure																	.	.	.	.	.																					.	.	.																.	.	.	.	.
Query SS confidence																	.	.	.	.	.																					.	.	.																.	.	.	.	.
Query Sequence		M	K	I	T	K	I	T	T	Y	R	L	P	P	R	W	.	.	.	.	.	M	F	L	K	I	E	T	D	E	G	V	V	G	W	G	E	P	V	I	E	.	.	.	G	R	A	R	T	V	E	A	A	V	H	E	L	G	D	.	.	.	.	.	Y	L	I	G	Q	D	P	S	R	I	N	D	L	W	Q	V	M
Query Conservation																	.	.	.	.	.																					.	.	.																.	.	.	.	.
Alig confidence																	.	.	.	.	.																					.	.	.																.	.	.	.	.
Template Conservation
Template Sequence		L	K	I	T	K	V	E	V	I	P	I	S	T	P	M	K	R	I	D	G	V	L	L	K	L	H	S	D	E	G	L	V	G	I	A	D	A	G	D	T	S	S	W	Y	R	G	E	T	Q	D	S	I	T	S	M	I	C	D	F	F	A	P	K	V	L	L	G	E	D	P	T	K	I	E	K	I	V	G	R	M
Template Known Secondary structure																													T	T	S												T	T	T	T														T					T	T	T	T			T	T
Template Predicted Secondary structure
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		68	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	R	A	G	F	Y	R	G	G	P	I	L	M	S	A	I	A	G	I	D	Q	A	L	W	D	I	K	G	K	V	L	N	A	P	V	W	Q	L	M	G	G	L	V	R	D	K	I	K	A	Y	S	W	V	G	G	D	R	P	A	D	V	I	D	G	I	K	T	L	R	E	I	G	F	D	T	F	K	L	N	G
Query Conservation
Alig confidence									.	.	.	.	.
Template Conservation									.	.	.	.	.
Template Sequence		D	I	L	T	R	D	N	.	.	.	.	.	N	Q	A	K	A	T	V	D	F	A	L	H	D	L	V	G	K	R	F	G	V	P	V	Y	Q	L	L	G	G	K	T	I	E	R	I	P	L	G	L	V	L	G	A	G	E	P	E	A	V	A	E	E	A	L	A	V	L	R	E	G	F	H	F	V	K	L	K	A
Template Known Secondary structure						S	S		.	.	.	.	.																				T	S	B					T	T			S		S	S			B							S																T		S
Template Predicted Secondary structure									.	.	.	.	.
Template SS confidence
		94	.	.	.	.	.	100						.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
		148	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	E	E	L	G	L	I	D	N	S	R	A	V	D	A	A	V	N	T	V	A	Q	I	R	E	A	F	G	N	Q	I	E	F	G	L	D	F	H	G	R	V	S	A	P	M	A	K	V	L	I	K	E	L	E	P	Y	R	P	L	F	I	E	E	P	V	L	A	E	Q	A	E	Y	Y	P	K	L	A	A	Q	T
Query Conservation
Alig confidence				.	.	.	.	.	.	.	.	.
Template Conservation				.	.	.	.	.	.	.	.	.
Template Sequence		G	G	.	.	.	.	.	.	.	.	.	P	L	K	A	D	I	A	M	V	A	E	V	R	R	A	V	G	D	D	V	D	L	F	I	D	I	N	G	A	W	T	Y	D	Q	A	L	T	T	I	R	A	L	E	K	Y	N	L	S	K	I	E	Q	P	L	P	A	W	D	L	D	G	M	A	R	L	R	G	K	V
Template Known Secondary structure			S	.	.	.	.	.	.	.	.	.																		T	T	S							T	T															G	G	G			S						S		T	T										T	T
Template Predicted Secondary structure				.	.	.	.	.	.	.	.	.
Template SS confidence
		169	170										.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
		228	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.		.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.
Predicted Secondary structure																																																															.
Query SS confidence																																																															.
Query Sequence		H	I	P	L	A	A	G	E	R	M	F	S	R	F	D	F	K	R	V	L	E	A	G	G	I	S	I	L	Q	P	D	L	S	H	A	G	G	I	T	E	C	Y	K	I	A	G	M	A	E	A	Y	D	V	T	L	A	P	H	C	P	L	.	G	P	I	A	L	A	A	C	L	H	I	D	F	V	S	Y	N	A
Query Conservation																																																															.
Alig confidence																																																															.
Template Conservation
Template Sequence		A	T	P	I	Y	A	D	E	S	A	Q	E	L	H	D	L	L	A	I	I	N	K	G	A	A	D	G	L	M	I	K	T	Q	K	A	G	G	L	L	K	A	Q	R	W	L	T	L	A	R	L	A	N	L	P	V	I	C	G	C	M	V	G	S	G	L	E	A	S	P	A	A	H	L	L	A	A	N	D	W	I
Template Known Secondary structure		S	S					S	T	T			S											T			S										T	S															T									S																	T	T	G
Template Predicted Secondary structure
Template SS confidence
		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.
		307	.	.	310	.	.	.	.					.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.
Predicted Secondary structure										.	.	.	.
Query SS confidence										.	.	.	.
Query Sequence		V	L	Q	E	Q	S	M	G	.	.	.	.	I	H	Y	N	K	G	A	E	L	L	D	F	V	K	N	K	E	D	F	S	M	V	G	G	F	F	K	P	L	T	K	P	G	L	G	V	E	I	D	E	A	K	V	I	E	F	S	K	N	A	P	D	W	R
Query Conservation										.	.	.	.
Alig confidence										.	.	.	.
Template Conservation
Template Sequence		A	Q	F	P	Q	E	N	A	G	P	L	H	I	H	D	C	L	N	S	R	D	I	D	N	D	I	A	L	N	V	P	R	F	E	G	G	Y	L	Y	P	N	D	G	P	G	L	G	I	E	L	N	E	D	L	V	R	R	L	V	T	P	G	K	A	A	R
Template Known Secondary structure		G	G	S		B									T	T		S	S	G	G	G					S	B	T	T						T	T							S	S	B	T				B									B		T	T
Template Predicted Secondary structure
Template SS confidence
		320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions