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Job DescriptionQ6BF17
Confidence100.00%DateThu Jan 5 12:37:31 GMT 2012
Rank58Aligned Residues341
% Identity32%Templatec2ppgB_
PDB info PDB header:isomeraseChain: B: PDB Molecule:putative isomerase; PDBTitle: crystal structure of putative isomerase from sinorhizobium meliloti
Resolution2.49 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  KITKITTYRLP. . . . . . . . . . . . . . . . . . . . . . PRWMFLKIETDEGVVGWGEPVIEGRA. RTVEAAVHELGDYLIGQDPS
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Template Sequence  RVKKIESFTLTLPRPNGRGYLVRKANRTVYPTFDRSVLVRIETENGAVGWGETYGLVAPRATXEIIDDLLADFTIGRDPF
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TTGGGTTT

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Query Sequence  RINDLWQVMYRAGFYRG. . GPILMSAIAGIDQALWDIKGKVLNAPVWQLMGGLVRDKIKAYSWVGGD. RPADVIDGIKTL
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Template Sequence  DAAAIHDDLYDLXRVRGYTGGFYVDALAAIDIALWDLAGKLAGLPVCKLLGGQRRDRIAAYISGLPEDTRAKRAELAAAW
Template Known Secondary structure  GTTGGGT
SSTSBGGGGTT



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Query Sequence  REIGFDTFKLNGCEELGLIDNSRAVDAAVNTVAQIREAFGNQIEFGLDFHGRVSAPMAKVLIKELEPYRPLFIEEPVLAE
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Template Sequence  QAKGFSSFKFASPVA. . . . . . . . . . . . . . KEXEILRERLGPAVRIACDXHWAHTASEAVALIKAXEPHGLWFAEAPVRTE
Template Known Secondary structure  TTT




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   177..180.........190. ........200.........210.........220.........230.........240..
 
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Query Sequence  QAEYYPKLAAQTHIPLAAGERMFSRFDFKRVLEAGGISILQPDLSHAGGITECYKIAGMAEAYDVTLAPHCPL. GPIALA
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Template Sequence  DIDGLARVAASVSTAIAVGEEWRTVHDXVPRVARRALAIVQPEXGH. KGITQFXRIGAYAHVHHIKVIPHATIGAGIFLA
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Query Sequence  ACLHIDFVSYNAVLQEQSMGIHYNKGAELLDFVKNKEDFSMVGGFFKPLTKPGLGVEIDEAKVIEFSKN
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Template Sequence  ASLQASAALANVDCHEFQHS. . . . . . IFEPNRRLLVGDXDCLNGEYVVPTGPGLGVEPSKEAQGLLKKH
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   327..330.........340...... ...350.........360.........370.........380.........
 
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No model constructed - rank, confidence too low




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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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