Job Description Q6BF17 Confidence 100.00% Date Thu Jan 5 12:37:31 GMT 2012 Rank 21 Aligned Residues 360 % Identity 26% Template c2podA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:mandelate racemase / muconate lactonizing enzyme; PDBTitle: crystal structure of a member of enolase superfamily from burkholderia2 pseudomallei k96243 Resolution 2.34 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.			.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure															.	.
Query SS confidence															.	.
Query Sequence		M	K	I	T	K	I	T	T	Y	R	L	P	P	.	.	R	W	M	F	L	K	I	E	T	D	E	G	V	V	G	W	G	E	P	V	I	E	G	R	A	R	T	V	E	A	A	V	H	E	L	G	D	Y	L	I	G	Q	D	P	S	R	I	N	D	L	W	Q	V	M	Y	R	A	G	F	Y	R	G	G	P	I
Query Conservation															.	.
Alig confidence															.	.																							.
Template Conservation																																							.
Template Sequence		L	K	I	T	E	I	E	T	L	R	P	E	E	F	P	N	L	L	W	V	L	V	H	T	D	E	G	I	T	G	L	G	E	T	F	Y	G	.	A	C	S	A	E	A	Y	I	H	E	W	A	A	N	R	L	I	G	E	D	P	L	Q	I	D	R	H	A	K	R	L	S	G	Y	L	G	F	R	S	A	G	A
Template Known Secondary structure													T	T	S	T	T									T	T	S									S		.											T	T					T	T	S		T	T									T			S	S	S	T	T	T	T
Template Predicted Secondary structure																																							.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.		.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.											.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																.	.	.	.	.	.	.	.	.	.
Query Sequence		L	M	S	A	I	A	G	I	D	Q	A	L	W	D	I	K	G	K	V	L	N	A	P	V	W	Q	L	M	G	G	L	V	R	D	K	I	K	A	Y	S	W	V	G	G	D	R	.	.	.	.	.	.	.	.	.	.	P	A	D	V	I	D	G	I	K	T	L	R	E	I	G	F	D	T	F	K	L	N	G	C
Query Conservation																																																.	.	.	.	.	.	.	.	.	.
Alig confidence																																																.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		E	X	R	G	N	S	A	L	D	I	A	L	W	D	I	F	G	K	A	T	G	Q	P	I	Y	Q	L	L	G	G	K	C	R	D	T	I	R	T	Y	N	T	C	A	G	P	H	Y	A	R	Y	D	D	L	N	A	F	L	H	R	A	D	E	L	A	L	D	L	L	D	S	G	I	T	A	X	K	I	W	P	F
Template Known Secondary structure																						T		B					T	T			S		S																																					T								T	T
Template Predicted Secondary structure
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
		149	150	.	.	.	.	.	.	.	.	.						160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.
Predicted Secondary structure													.	.	.	.	.
Query SS confidence													.	.	.	.	.
Query Sequence		E	E	L	G	L	I	D	N	S	R	A	.	.	.	.	.	V	D	A	A	V	N	T	V	A	Q	I	R	E	A	F	G	N	Q	I	E	F	G	L	D	F	H	G	R	V	S	A	P	M	A	K	V	L	I	K	E	L	E	P	Y	R	P	L	F	I	E	E	P	V	L	A	E	Q	A	E	Y	Y	P	K	L
Query Conservation													.	.	.	.	.
Alig confidence													.	.	.	.	.
Template Conservation
Template Sequence		D	P	Y	A	E	A	S	D	G	Y	Y	I	S	K	S	D	L	K	R	A	L	E	P	F	E	K	I	R	R	A	V	G	D	K	X	D	V	X	V	E	F	H	S	L	W	N	L	P	P	A	L	Q	I	A	E	A	L	R	E	Y	E	T	F	W	H	E	D	P	I	R	X	D	S	L	S	S	L	K	R	Y
Template Known Secondary structure		G	G	G	S	G	G	G	T	T	S											T										T	G	G	G								T	T															G	G	G	T		S				S		S		S	S	S	G	G	G
Template Predicted Secondary structure
Template SS confidence
		179	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.
		224	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	A	Q	T	H	I	P	L	A	A	G	E	R	M	F	S	R	F	D	F	K	R	V	L	E	A	G	G	I	S	I	L	Q	P	D	L	S	H	A	G	G	I	T	E	C	Y	K	I	A	G	M	A	E	A	Y	D	V	T	L	A	P	H	C	P	L	G	P	I	A	L	A	A	C	L	H	I	D	F	V	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	E	R	S	L	A	P	V	C	A	S	E	T	L	A	T	R	W	G	F	R	D	L	L	E	T	N	A	A	G	I	V	X	L	D	I	S	W	C	G	G	L	S	E	A	R	K	I	A	S	X	A	E	A	W	H	L	P	V	A	P	H	D	C	T	G	P	V	V	L	T	A	S	T	H	L	S	L	N	A
Template Known Secondary structure				T		S	S						T	T													T	T									T	T	T	T	T															T	T								S	S
Template Predicted Secondary structure
Template SS confidence
		259	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.
		304	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	N	A	V	L	Q	E	Q	S	M	G	I	H	Y	N	K	G	A	E	L	L	D	F	V	K	N	K	E	D	F	S	M	V	G	G	F	F	K	P	L	T	K	P	G	L	G	V	E	I	D	E	A	K	V	I	E	F	S	K	N	A	P	D
Query Conservation
Alig confidence														.	.	.	.	.
Template Conservation														.	.	.	.	.
Template Sequence		P	N	A	L	V	Q	E	S	V	R	A	F	.	.	.	.	.	Y	D	G	W	Y	R	D	L	V	T	A	L	P	T	V	K	D	G	H	I	T	V	P	D	G	P	G	L	G	L	E	L	X	P	D	I	R	E	R	L	T	I	A	V	R	N
Template Known Secondary structure		T	T	B										.	.	.	.	.		T	T	T	T	T	T	T	B	S							T	T						S	S	S	B	T	S			B		T	T					S
Template Predicted Secondary structure														.	.	.	.	.
Template SS confidence
		339	340	.	.	.	.	.	.	.	.	.	350						.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions