Job Description Q6BF17 Confidence 100.00% Date Thu Jan 5 12:37:31 GMT 2012 Rank 71 Aligned Residues 346 % Identity 25% Template c2oz3F_ PDB info PDB header:lyase Chain: F: PDB Molecule:mandelate racemase/muconate lactonizing enzyme; PDBTitle: crystal structure of l-rhamnonate dehydratase from azotobacter2 vinelandii Resolution 2.00 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.																																.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50
Predicted Secondary structure																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	I	T	K	I	T	T	Y	R	L	P	P	R	W	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	M	F	L	K	I	E	T	D	E	G	V	V	G	W	G	E	P	V	I	E	G	R	A	R	T	V	E	A	A	V	H	E	L	G	D
Query Conservation																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.
Template Conservation																																																																		.	.
Template Sequence		T	I	K	Q	V	R	A	F	V	L	R	G	D	G	H	W	I	D	D	H	I	S	T	P	X	G	K	Y	P	E	Y	R	Q	S	R	R	S	F	G	I	N	V	L	G	T	L	V	V	E	I	E	A	S	D	G	N	V	G	F	A	V	T	T	G	.	.	G	E	P	A	A	Y	I	V	E	K	H	L	A	R
Template Known Secondary structure		B													S		G	G	G	S	S				G	G	G	G	S	G	G	G	S	S						T	T	T	S	S										T	T	S										.	.											T	G	G	G
Template Predicted Secondary structure																																																																		.	.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.			.	70	.	.	.	.	.	.	.	.	.	80	.	.
		51	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.		.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																											.
Query SS confidence																											.
Query Sequence		Y	L	I	G	Q	D	P	S	R	I	N	D	L	W	Q	V	M	Y	R	A	G	F	Y	R	G	.	G	P	I	L	M	S	A	I	A	G	I	D	Q	A	L	W	D	I	K	G	K	V	L	N	A	P	V	W	Q	L	M	G	G	L	V	R	D	K	I	K	A	Y	S	W	V	G	G	D	R	P	A	D	V	I
Query Conservation																											.
Alig confidence																											.																																															.	.
Template Conservation																																																																										.	.
Template Sequence		F	L	E	G	A	R	V	T	D	I	E	R	I	W	D	Q	X	Y	N	S	T	L	Y	Y	G	R	K	G	L	V	I	N	T	I	S	G	V	D	L	A	L	W	D	L	L	G	K	V	R	R	E	P	V	H	Q	L	L	G	G	A	V	R	D	E	L	Q	F	Y	A	T	G	A	.	.	R	P	D	L	A	Q
Template Known Secondary structure		G	T	T	T	S	B	T	T														G	G	G		S	S	T																						T	S	B					T	T			S	S	S								S	S	.	.
Template Predicted Secondary structure																																																																										.	.
Template SS confidence
		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.			.	.	.	.	.	.
		130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	G	I	K	T	L	R	E	I	G	F	D	T	F	K	L	N	G	C	E	E	L	G	L	I	D	N	S	R	A	V	D	A	A	V	N	T	V	A	Q	I	R	E	A	F	G	N	Q	I	E	F	G	L	D	F	H	G	R	V	S	A	P	M	A	K	V	L	I	K	E	L	E	P	Y	R	P	L	F	I	E
Query Conservation
Alig confidence																						.	.	.	.	.	.	.	.	.
Template Conservation																						.	.	.	.	.	.	.	.	.
Template Sequence		K	X	G	F	I	G	G	K	X	P	L	H	H	G	P	S	E	G	E	E	.	.	.	.	.	.	.	.	.	G	L	K	K	N	L	E	E	L	A	T	X	R	E	R	V	G	P	D	F	W	L	X	F	D	C	W	X	S	L	D	L	N	Y	A	T	R	L	A	R	G	A	R	E	Y	G	L	K	W	I	E
Template Known Secondary structure			T	T		S										G	G	G				.	.	.	.	.	.	.	.	.																		S	S	S							T	T															G	G	G	T
Template Predicted Secondary structure																						.	.	.	.	.	.	.	.	.
Template SS confidence
		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.										190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
		210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230			.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.
Predicted Secondary structure																							.	.
Query SS confidence																							.	.
Query Sequence		E	P	V	L	A	E	Q	A	E	Y	Y	P	K	L	A	A	Q	T	H	I	P	.	.	L	A	A	G	E	R	M	F	S	R	F	D	F	K	R	V	L	E	A	G	G	I	S	I	L	Q	P	D	L	S	H	A	G	G	I	T	E	C	Y	K	I	A	G	M	A	E	A	Y	D	V	T	L	A	P	H	C	P
Query Conservation																							.	.
Alig confidence																							.	.
Template Conservation
Template Sequence		E	A	L	P	P	D	D	Y	W	G	Y	A	E	L	R	R	N	A	P	T	G	X	X	V	T	T	G	E	H	E	A	T	R	W	G	F	R	X	L	L	E	X	G	C	C	D	I	I	Q	P	D	V	G	W	C	G	G	V	T	E	L	L	K	I	S	A	L	A	D	A	H	N	A	L	V	V	P	H	G	S
Template Known Secondary structure				S		T	T												S		T	T							T	T													T	T			S						T	T	T	S	S															T	T
Template Predicted Secondary structure
Template SS confidence
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320
		288	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.			.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.
Predicted Secondary structure																																																					.	.
Query SS confidence																																																					.	.
Query Sequence		L	G	P	I	A	L	A	A	C	L	H	I	D	F	V	S	Y	N	A	V	L	Q	E	Q	S	M	G	I	H	Y	N	K	G	A	E	L	L	D	F	V	K	N	K	E	D	F	S	M	V	G	G	.	.	F	F	K	P	L	T	K	P	G	L	G	V	E	I	D	E	A	K	V	I	E	F	S	K	N	A	P
Query Conservation																																																					.	.
Alig confidence				.	.	.	.	.																																													.	.
Template Conservation				.	.	.	.	.
Template Sequence		S	V	.	.	.	.	.	Y	S	Y	H	F	V	A	T	R	Q	N	S	P	F	A	E	F	L	X	X	A	P	K	A	D	Q	V	V	P	X	F	H	P	Q	L	L	G	E	P	V	P	E	N	G	R	X	R	L	S	R	L	D	Q	P	G	F	G	V	T	L	N	P	E	C	Q	L	H	R	P	Y	T	H	E
Template Known Secondary structure		T		.	.	.	.	.							T	T		T	T			S							S	T	T	S		S				T	T	T	T	T			T					B	T	T				G	G	G			S	S	B	T						T	T	S
Template Predicted Secondary structure				.	.	.	.	.
Template SS confidence
		321	.						.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions