Job Description Q6BF17 Confidence 100.00% Date Thu Jan 5 12:37:31 GMT 2012 Rank 56 Aligned Residues 337 % Identity 26% Template c2oqhD_ PDB info PDB header:isomerase Chain: D: PDB Molecule:putative isomerase; PDBTitle: crystal structure of an isomerase from streptomyces coelicolor a3(2) Resolution 1.98 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.													.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.
Predicted Secondary structure																	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	K	I	T	K	I	T	T	Y	R	L	P	P	R	W	.	.	.	.	.	.	.	.	.	.	.	.	M	F	L	K	I	E	T	D	E	G	V	V	G	W	G	E	P	V	I	E	G	R	A	R	T	V	E	A	A	V	H	E	L	G	D	Y	L	I	G	Q	D	P	S	R	I	N	D	L	W	Q	V	M	Y
Query Conservation																	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.
Template Conservation																																																.	.	.
Template Sequence		L	K	I	T	D	V	D	V	W	V	V	N	L	P	L	V	N	P	F	E	T	K	T	G	E	T	R	T	V	V	R	V	R	T	D	S	G	V	E	G	W	G	E	T	X	W	.	.	.	G	A	P	V	A	A	I	V	R	R	X	A	P	D	L	I	G	T	S	P	F	A	L	E	A	F	H	R	K	Q	H
Template Known Secondary structure																B																				T	T	S										.	.	.	S															T	T	S		T	T									T	T
Template Predicted Secondary structure																																																.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.				.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
		69	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.											.	.	130	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																													.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																													.	.	.	.	.	.	.	.	.	.
Query Sequence		R	A	G	F	Y	R	G	G	P	I	L	M	S	A	I	A	G	I	D	Q	A	L	W	D	I	K	G	K	V	L	N	A	P	V	W	Q	L	M	G	G	L	V	R	D	K	I	K	A	Y	S	W	V	G	G	D	R	P	A	D	.	.	.	.	.	.	.	.	.	.	V	I	D	G	I	K	T	L	R	E	I
Query Conservation																																																													.	.	.	.	.	.	.	.	.	.
Alig confidence								.																																																					.	.	.	.	.	.	.	.	.	.
Template Conservation								.
Template Sequence		X	V	P	F	F	Y	.	G	Y	L	G	Y	A	A	I	A	A	V	D	V	A	C	W	D	A	X	G	K	A	T	G	Q	S	V	T	D	L	L	G	G	A	V	R	D	E	V	P	I	T	A	L	I	T	R	A	D	A	P	G	A	T	P	A	D	L	P	K	A	X	A	E	H	A	V	R	V	V	E	E	G
Template Known Secondary structure		T						.																								T		B	T	T	G	G	G	T			S		S										G	G	G	S	T	T			G	G	G
Template Predicted Secondary structure								.
Template SS confidence
		84	.	.	.	.	.		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
		139	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	F	D	T	F	K	L	N	G	C	E	E	L	G	L	I	D	N	S	R	A	V	D	A	A	V	N	T	V	A	Q	I	R	E	A	F	G	N	Q	I	E	F	G	L	D	F	H	G	R	V	S	A	P	M	A	K	V	L	I	K	E	L	E	P	Y	R	P	L	F	I	E	E	P	V	L	A	E	Q	A	E
Query Conservation
Alig confidence													.	.	.	.	.	.	.	.	.																		.																																						.	.
Template Conservation													.	.	.	.	.	.	.	.	.																		.																																						.	.
Template Sequence		G	F	D	A	V	K	L	K	G	T	T	.	.	.	.	.	.	.	.	.	D	C	A	G	D	V	A	I	L	R	A	V	R	E	A	L	P	.	G	V	N	L	R	V	D	P	N	A	A	W	S	V	P	D	S	V	R	A	G	I	A	L	E	E	L	D	L	E	Y	L	E	D	P	C	V	.	.	G	I	E
Template Known Secondary structure				S								S	.	.	.	.	.	.	.	.	.																	T	.	T	S							T	T		S													G	G	G			S						S	S	.	.
Template Predicted Secondary structure													.	.	.	.	.	.	.	.	.																		.																																						.	.
Template SS confidence
		163	.	.	.	.	.	.	170	.	.	.										.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190		.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.			.	.	230
		219	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.		.	290	.	.	.	.	.	.	.
Predicted Secondary structure																																																																								.
Query SS confidence																																																																								.
Query Sequence		Y	Y	P	K	L	A	A	Q	T	H	I	P	L	A	A	G	E	R	M	F	S	R	F	D	F	K	R	V	L	E	A	G	G	I	S	I	L	Q	P	D	L	S	H	A	G	G	I	T	E	C	Y	K	I	A	G	M	A	E	A	Y	D	V	T	L	A	P	H	C	P	L	.	G	P	I	A	L	A	A	C	L
Query Conservation																																																																								.
Alig confidence																																																																								.
Template Conservation
Template Sequence		G	X	A	Q	V	K	A	K	V	R	I	P	L	C	T	N	X	C	V	V	R	F	E	D	F	A	P	A	X	R	L	N	A	V	D	V	I	H	G	D	V	Y	K	W	G	G	I	A	A	T	K	A	L	A	A	H	C	E	T	F	G	L	G	X	N	L	H	S	G	G	E	L	G	I	A	T	A	A	H	L
Template Known Secondary structure												S					S	S	S			S										T	T			S										T	S														T	T								S	S
Template Predicted Secondary structure
Template SS confidence
		231	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310
		298	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	I	D	F	V	S	Y	N	A	V	L	Q	E	Q	S	M	G	I	H	Y	N	K	G	A	E	L	L	D	F	V	K	N	K	E	D	F	S	M	V	G	G	F	F	K	P	L	T	K	P	G	L	G	V	E	I	D	E	A	K	V	I	E	F	S
Query Conservation
Alig confidence																	.	.	.	.	.	.	.	.
Template Conservation																	.	.	.	.	.	.	.	.
Template Sequence		A	V	V	S	S	T	P	V	L	S	R	A	I	D	S	.	.	.	.	.	.	.	.	X	Y	Y	L	H	A	D	D	I	I	E	P	L	H	L	E	N	G	R	L	R	V	P	S	G	P	G	L	G	V	S	V	D	E	D	K	L	R	H	Y	A
Template Known Secondary structure						T		T	T			S					.	.	.	.	.	.	.	.		G	G	G	B		S		S	B							T	T							S	S	B	T	S			B
Template Predicted Secondary structure																	.	.	.	.	.	.	.	.
Template SS confidence
		311	.	.	.	.	.	.	.	.	320	.	.	.	.	.									.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions