Job Description Q6BF17 Confidence 100.00% Date Thu Jan 5 12:37:31 GMT 2012 Rank 6 Aligned Residues 352 % Identity 22% Template c2oo6A_ PDB info PDB header:isomerase Chain: A: PDB Molecule:putative l-alanine-dl-glutamate epimerase; PDBTitle: crystal structure of putative l-alanine-dl-glutamate epimerase from2 burkholderia xenovorans strain lb400 Resolution 1.80 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.				.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
Predicted Secondary structure																	.	.	.
Query SS confidence																	.	.	.
Query Sequence		M	K	I	T	K	I	T	T	Y	R	L	P	P	R	W	.	.	.	M	F	L	K	I	E	T	D	E	G	V	V	G	W	G	E	P	V	I	E	G	R	A	R	T	V	E	A	A	V	H	E	L	G	D	Y	L	I	G	Q	D	P	S	R	I	N	D	L	W	Q	V	M	Y	R	A	G	F	Y	R	G	G	P
Query Conservation																	.	.	.
Alig confidence																	.	.	.
Template Conservation
Template Sequence		L	K	V	V	S	V	D	T	L	C	C	D	A	G	W	R	N	Y	H	F	V	K	L	T	T	D	E	G	I	V	G	W	S	E	F	D	E	G	F	G	S	P	G	V	T	A	V	I	E	Q	L	G	K	R	L	V	G	A	S	V	M	E	H	E	R	F	F	A	E	A	Y	C	L	T	R	P	A	T	G	G
Template Known Secondary structure			B												S	S	S										T	T										S	T	T	T		T	T													T	T	S	B	T	T													T	G	G	G		S
Template Predicted Secondary structure
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120															.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.
Predicted Secondary structure																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	L	M	S	A	I	A	G	I	D	Q	A	L	W	D	I	K	G	K	V	L	N	A	P	V	W	Q	L	M	G	G	L	V	R	D	K	I	K	A	Y	S	W	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G	D	R	P	A	D	V	I	D	G	I	K	T	L	R	E	I	G	F	D	T	F
Query Conservation																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	V	S	E	G	I	G	A	I	E	N	A	L	L	D	A	K	A	K	T	L	N	V	P	C	Y	E	L	L	G	G	K	L	R	D	R	V	P	V	Y	W	S	H	C	P	T	W	R	I	N	H	P	K	F	F	G	P	P	V	T	D	L	D	G	V	K	R	T	A	E	E	A	R	E	R	Q	F	R	A	I
Template Known Secondary structure																						T	T	S	B	G	G	G	G	T	T			S		S								S	T	T							T	T	T	S	S	S				S														T	T
Template Predicted Secondary structure
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
		144	.	.	.	.	.	150	.																		.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.
Predicted Secondary structure										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	L	N	G	C	E	E	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	L	I	D	N	S	R	A	V	D	A	A	V	N	T	V	A	Q	I	R	E	A	F	G	N	Q	I	E	F	G	L	D	F	H	G	R	V	S	A	P	M	A	K	V	L	I	K	E	L	E	P	Y	R	P	L
Query Conservation										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	T	N	I	F	I	H	D	D	G	P	L	H	A	W	R	P	G	F	A	V	P	F	Q	P	A	L	N	V	D	R	K	V	L	R	N	L	R	A	H	L	E	A	L	R	D	G	A	G	P	D	V	E	I	L	L	D	L	N	F	N	A	K	P	E	G	Y	L	K	I	L	R	E	L	A	D	F	D	L	F
Template Known Secondary structure									S	S	S	S					B	G	G	G	T	B	S			T	T																								S	S	S							T	T		S												T	T	T	S			S
Template Predicted Secondary structure
Template SS confidence
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
		207	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	I	E	E	P	V	L	A	E	Q	A	E	Y	Y	P	K	L	A	A	Q	T	H	I	P	L	A	A	G	E	R	M	F	S	R	F	D	F	K	R	V	L	E	A	G	G	I	S	I	L	Q	P	D	L	S	H	A	G	G	I	T	E	C	Y	K	I	A	G	M	A	E	A	Y	D	V	T	L	A	P	H	C
Query Conservation
Alig confidence									.	.																																													.
Template Conservation									.	.																																													.
Template Sequence		W	V	E	I	D	S	Y	.	.	S	P	Q	G	L	A	Y	V	R	N	H	S	P	H	P	I	S	S	C	E	T	L	F	G	I	R	E	F	K	P	F	F	D	A	N	A	V	D	V	A	I	V	D	T	.	I	W	N	G	V	W	Q	S	M	K	I	A	A	F	A	D	A	H	D	I	N	V	A	P	H	N
Template Known Secondary structure								S	.	.											T		S	S						T	T													T	T			S							.																		T	T
Template Predicted Secondary structure									.	.																																													.
Template SS confidence
		241	.	.	.	.	.	.			.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.		.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.
		287	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	L	G	P	I	A	L	A	A	C	L	H	I	D	F	V	S	Y	N	A	V	L	Q	E	Q	S	M	G	I	H	Y	N	K	G	A	E	L	L	D	F	V	K	N	K	E	D	F	S	M	V	G	G	F	F	K	P	L	T	K	P	G	L	G	V	E	I	D	E	A	K	V	I	E	F	S
Query Conservation
Alig confidence																														.	.	.	.	.	.
Template Conservation																														.	.	.	.	.	.
Template Sequence		F	Y	G	H	L	C	T	M	I	N	A	N	F	A	A	A	V	P	N	L	R	I	M	E	T	D	I	D	.	.	.	.	.	.	R	L	A	W	E	D	E	L	F	T	H	A	P	E	Y	Q	N	G	E	L	I	I	P	D	R	P	G	W	G	T	D	P	V	E	E	A	I	L	A	H	P
Template Known Secondary structure			S																S	S	B								S	.	.	.	.	.	.			T	T	T	G	G	G	B	S							T	T							S	S	B	S	S			B								S
Template Predicted Secondary structure																														.	.	.	.	.	.
Template SS confidence
		318	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.							.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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