Job Description Q6BF17 Confidence 34.71% Date Thu Jan 5 12:37:31 GMT 2012 Rank 421 Aligned Residues 165 % Identity 9% Template c2o7qA_ PDB info PDB header:oxidoreductase,transferase Chain: A: PDB Molecule:bifunctional 3-dehydroquinate dehydratase/shikimate PDBTitle: crystal structure of the a. thaliana dhq-dehydroshikimate-sdh-2 shikimate-nadp(h) Resolution 2.20 Å

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		111	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																																.	.
Query SS confidence																																																																																.	.
Query Sequence		R	D	K	I	K	A	Y	S	W	V	G	G	D	R	P	A	D	V	I	D	G	I	K	T	L	R	E	I	G	F	D	T	F	K	L	N	G	C	E	E	L	G	L	I	D	N	S	R	A	V	D	A	A	V	N	T	V	A	Q	I	R	E	A	F	G	N	Q	I	E	F	G	L	D	F	H	G	R	V	.	.
Query Conservation																																																																																.	.
Alig confidence																																							.	.	.	.	.	.	.	.																				.	.													.	.
Template Conservation																																							.	.	.	.	.	.	.	.																				.	.
Template Sequence		K	N	P	S	L	I	C	A	P	V	M	A	D	S	I	D	K	M	V	I	E	T	S	K	A	H	E	L	G	A	D	L	V	E	I	R	L	.	.	.	.	.	.	.	.	D	W	L	K	D	F	N	P	L	E	D	L	K	T	I	I	K	K	S	.	.	P	L	P	T	L	F	T	Y	R	P	K	W	E	G
Template Known Secondary structure			S											S	S															T		S						G	.	.	.	.	.	.	.	.	G	G		S	S															.	.	S	S								B	G	G	G	T
Template Predicted Secondary structure																																							.	.	.	.	.	.	.	.																				.	.
Template SS confidence
		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.									.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.			.	.	.	150	.	.	.	.	.	.	.	.	.	160
							189	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.		.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.										240	.	.	.	.	.	.	.	.	.	250	.	.	.
Predicted Secondary structure		.	.	.	.	.																										.																											.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.																										.																											.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	S	A	P	M	A	K	V	L	I	K	E	L	E	P	Y	R	P	L	F	I	E	E	P	V	L	.	A	E	Q	A	E	Y	Y	P	K	L	A	A	Q	T	H	I	P	L	A	A	G	E	R	M	F	S	.	.	.	.	.	.	.	.	.	R	F	D	F	K	R	V	L	E	A	G	G	I	S
Query Conservation		.	.	.	.	.																										.																											.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.																										.																					.	.					.	.	.	.	.	.	.	.	.
Template Conservation																																																					.	.
Template Sequence		G	Q	Y	E	G	D	E	N	E	R	R	D	V	L	R	L	A	M	E	L	G	A	D	Y	I	D	V	E	L	Q	V	A	S	E	F	I	K	S	I	D	G	K	K	P	G	K	F	K	V	I	V	.	.	S	S	H	N	Y	Q	N	T	P	S	V	E	D	L	D	G	L	V	A	R	I	Q	Q	T	G	A	D
Template Known Secondary structure		S	S	B		S															T	T		S																T	T	T				S	S						.	.					S	S																		T	T		S
Template Predicted Secondary structure																																																					.	.
Template SS confidence
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.			.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
		254	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	L	Q	P	D	L	S	H	A	G	G	I	T	E	C	Y	K	I	A	G	M	A	E	A	Y	D	V	T	L	A	P	H	C	P	L
Query Conservation
Alig confidence											.
Template Conservation											.
Template Sequence		I	V	K	I	A	T	T	A	V	.	D	I	A	D	V	A	R	M	F	H	I	T	S	K	A	Q	V	P	T	I	G	L	V	M	G
Template Known Secondary structure										S	.	S	G	G	G												S	S								S
Template Predicted Secondary structure											.
Template SS confidence
		239	240	.	.	.	.	.	.	.		.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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