Return to main results Retrieve Phyre Job Id

Job DescriptionQ6BF17
Confidence100.00%DateThu Jan 5 12:37:31 GMT 2012
Rank51Aligned Residues352
% Identity23%Templatec2hxtA_
PDB info PDB header:unknown functionChain: A: PDB Molecule:l-fuconate dehydratase; PDBTitle: crystal structure of l-fuconate dehydratase from xanthomonas2 campestris liganded with mg++ and d-erythronohydroxamate
Resolution1.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.... .....20.........30.... .....40.........50.........60.
Predicted Secondary structure 



....................







.









Query SS confidence 











. . . . . . . . . . . . . . . . . . . .



















.


























Query Sequence  ITKITTYRLPPR. . . . . . . . . . . . . . . . . . . . WMFLKIETDEGVVGWGEPVI. EGRARTVEAAVHELGDYLIGQDPSRIN
Query Conservation 
  
        ....................  

 
 
  
  
 

   .             
   
 
       
Alig confidence 











....................



















.


























Template Conservation 
  
    
  

  
   
             


 
 

 
  
 

                 
   
 
       
Template Sequence  IIALETHDVRFPTSRELDGSDAMNPDPDYSAAYVVLRTDGAEDLAGYGLVFTIGRGNDVQTAAVAALAEHVVGLSVDKVI
Template Known Secondary structure 

GGGTTTT

SS
SS


SS
TT

STTTTTT
B
Template Predicted Secondary structure 

































Template SS confidence 















































































   4.....10.........20.........30.........40.........50.........60.........70.........80...
 
   62....... 70.........80.........90.........100.........110.........120..
Predicted Secondary structure  ........

























...........
Query SS confidence 







. . . . . . . .




















































. . . . . . . . . . .
Query Sequence  DLWQVMYR. . . . . . . . AGFYRGGPILMSAIAGIDQALWDIKGKVLNAPVWQLMGGLVRDKIKAYSWVGG. . . . . . . . . . .
Query Conservation       
  ........            
 



 

 

 

  
 

  



  
           ...........
Alig confidence 







........




















































...........
Template Conservation       
                 
    
 



 




 

  
 

  



  
  
                   
Template Sequence  ADLGAFARRLTNDSQLRWLGPEKGVMHMAIGAVINAAWDLAARAANKPLWRFIAELTPEQLVDTIDFRYLSDALTRDEAL
Template Known Secondary structure 
T
T
SSSTTSBTS



TT
TTT

Template Predicted Secondary structure 



































Template SS confidence 















































































   84.....90.........100.........110.........120.........130.........140.........150.........160...
 
   123......130.........140.........150.........160.........
Predicted Secondary structure  .................................


















Query SS confidence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .














































Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . DRPADVIDGIKTLREIGFDTFKLNGCEELGLIDNSRAVDAAVNTVAQ
Query Conservation  .................................                
    




              
   
  
Alig confidence  .................................


























.........










Template Conservation                      
  
                         

   




 .........    
   
  
Template Sequence  AILRDAQPQRAARTATLIEQGYPAYTTSPGWLGYSDEKLVRLAKEAVADGFRTIKLKVGA. . . . . . . . . NVQDDIRRCRL
Template Known Secondary structure  GGG

TTS
TT
S

S.........
Template Predicted Secondary structure 
























.........
Template SS confidence 















































































   164.....170.........180.........190.........200.........210.........220... ......230....
 
   170.........180.........190.........200.........210.........220...... ...230.........240........
Predicted Secondary structure 



















.








Query SS confidence 
























































.





















Query Sequence  IREAFGNQIEFGLDFHGRVSAPMAKVLIKELEPYRPLFIEEPVLAEQAEYYPKLAAQ. THIPLAAGERMFSRFDFKRVLE
Query Conservation 

   
    
 



       
      
    
  



    
      
   .  



 

           
 
Alig confidence 
























































.





















Template Conservation 

   
    
 



       
      
    
  



    
      
      



 

           
 
Template Sequence  ARAAIGPDIAMAVDANQRWDVGPAIDWMRQLAEFDIAWIEEPTSPDDVLGHAAIRQGITPVPVSTGEHTQNRVVFKQLLQ
Template Known Secondary structure 
SSS
TT


TTGGG

S


S
TT
TTS

TT

S
Template Predicted Secondary structure 






























Template SS confidence 















































































   235....240.........250.........260.........270.........280.........290.........300.........310....
 
   249250.........260.........270.........280........ .290.........300.........310.........320.......
Predicted Secondary structure 


















.





















Query SS confidence 







































.






































Query Sequence  AGGISILQPDLSHAGGITECYKIAGMAEAYDVTLAPHCPL. GPIALAACLHIDFVSYNAVLQEQSMGIHYNKGAELLDFV
Query Conservation      
 
  
    



        
   

    
   .  
   
  




       
                 
Alig confidence 







































.































.....

Template Conservation   

 
 
  
    



   


  
   

    
         
                          .....  
Template Sequence  AGAVDLIQIDAARVGGVNENLAILLLAAKFGVRVFPHAGGVGLCELVQHLAMADFVAITGKMEDRAIEFVDHL. . . . . HQ
Template Known Secondary structure  T

S


TTTSSTT





STTTT


TT



SS.....GG
Template Predicted Secondary structure 


































.....
Template SS confidence 















































































   315....320.........330.........340.........350.........360.........370.........380....... ..
 
   328.330.........340.........350.........360........
Predicted Secondary structure 

























Query SS confidence 








































Query Sequence  KNKEDFSMVGGFFKPLTKPGLGVEIDEAKVIEFSKNAPDWR
Query Conservation            
   

  







 
 
           
Alig confidence 








































Template Conservation      
     
    
  







 
 
  
        
Template Sequence  HFLDPVRIQHGRYLAPEVPGFSAEMHPASIAEFSYPDGRFW
Template Known Secondary structure  GBSS


TT



SSB
S

B
BTTTS
Template Predicted Secondary structure 
























Template SS confidence 








































   390.........400.........410.........420.........430
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions